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GenVisr
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GenVisR - adding on genomic positions to CovGen graph
GenVisR
GenCov
2.2 years ago
Amy_
• 0
3
votes
10
replies
3.6k
views
error in package GenVisR while installing
GenVisR
GenVis
updated 13 months ago by
zlskidmore
▴ 30 • written 2.5 years ago by
abhisikta
• 0
0
votes
1
reply
1.3k
views
Unable to install GenVisR under most recent R / Bioconductor version; waterfall option mainDropMut is not working
Install
mainDropMut
GenVisR
updated 2.6 years ago by
Hervé Pagès
16k • written 2.6 years ago by
Michel
• 0
0
votes
0
replies
2.2k
views
How to generate a waterfall plot of mutations and CNAs that don't overlap
GenVisR
maftools
2.6 years ago
e
• 0
0
votes
1
reply
1.3k
views
Waterfall failing with custom file: Error in `colnames<-`(`*tmp*`, value = c("sample", "gene", "trv_type")) : attempt to set 'colnames' on an obje…
variants
waterfall
GenVisR
updated 4.1 years ago by
zlskidmore
▴ 30 • written 4.2 years ago by
Jeni
▴ 10
0
votes
1
reply
857
views
Adding layer to legend in waterfall plot
GenVisR
ggplot2
waterfall
5.2 years ago
sheneicechang
• 0
0
votes
0
replies
1.1k
views
Output GenVisR mutation frequency data by gene name instead of by sample name
GenVisR
mutation frequency
R
cancer
bioconductor
5.3 years ago
sheneicechang
• 0
0
votes
1
reply
1.3k
views
how to save picture and add title to waterfall GenVisR mutation analyse?
GenVisr
genvisr
waterfall
mutation
updated 6.1 years ago by
zlskidmore
▴ 30 • written 6.1 years ago by
ZihaoXing
• 0
0
votes
1
reply
1.0k
views
Issues with lohSpec
genvisr
lohSpec
6.5 years ago
dharia.priyadarshani
• 0
0
votes
2
replies
1.4k
views
Copy Number plot cnSpec - how to order samples
genvisr
6.6 years ago
cedric.vmdl
• 0
0
votes
4
replies
2.3k
views
GenVisR- cnSpec CNV plot
GenVisR
7.0 years ago • updated 6.9 years ago
daijieqiong
▴ 10
0
votes
2
replies
1.4k
views
an error in TvTi: package GenVisR
GenVisR
updated 7.9 years ago by
zlskidmore
▴ 30 • written 7.9 years ago by
Bogdan
▴ 670
2
votes
5
replies
3.0k
views
GenVisR Installation error message
genvisR
8.9 years ago • updated 8.8 years ago
Deep Adhya
▴ 20
13 results • Page
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Comment: RnBeads::combine() - error?
by
Urotree
• 0
pheno <- rnb.set.arrays@pheno # Phenotypic data sites <- rnb.set.arrays@sites # CpG site definitions (data.frame) meth <- rnb.set…
Comment: RnBeads::combine() - error?
by
Urotree
• 0
![enter image description here][1] [1]: /media/images/40d9778d-b044-4405-9b3d-2ba835f6 Hi, after I convert to RnBiseqSet, it shows "All…
Comment: RnBeads::combine() - error?
by
Urotree
• 0
rnb.set.biseq <- RnBiseqSet( pheno = pheno, sites = sites, meth = meth, covg = NULL, # This can be NULL if coverage …
Answer: How to increase font for gene name and increase arrow size for GVIZ's ( UcscTra
by
ming
• 0
`fontsize` for title font size, `fontsize.group` for gene symbol font size tx.track <- GeneRegionTrack(hg38.gtf, …
Answer: How do I fix an odd voom plot in a combined dataset?
by
Gordon Smyth
52k
voom is a DE analysis method rather than a normalization method. voom expects the design matrix to be the same complete design matrix that …
Votes
Answer: enrichGOgradient color change
How do I fix an odd voom plot in a combined dataset?
Answer: Warning message when running limma with covariates
A: GWAS analysis with Illumina HumanOmni5-4 BeadChip - recommended software and wor
A: GWAS analysis with Illumina HumanOmni5-4 BeadChip - recommended software and wor
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