Showing : Geoquery • reset
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how can i convert a gse object(expression sets) to affybatch
convert GEOquery convert GEOquery
updated 13.8 years ago by 21k • written 13.8 years ago by ▴ 100
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8
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3.8k
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GEOquery Error
GEOquery GEOquery
updated 13.8 years ago by 21k • written 13.8 years ago by ▴ 340
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3
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1.7k
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Problems selecting rows from dataframe (exprs) of GNF Atlas data....
GO probe GEOquery GO probe GEOquery
updated 13.9 years ago by ▴ 60 • written 13.9 years ago by ▴ 150
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3
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1.5k
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Problems selecting rows from dataframe (exprs) of GNF Atlas data....
GO probe GEOquery GO probe GEOquery
updated 13.9 years ago by ▴ 60 • written 13.9 years ago by ▴ 150
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1
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6.1k
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How to extract Phenotype data from GSE
GEOquery GEOquery
updated 14.1 years ago by ▴ 610 • written 14.1 years ago by ▴ 570
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1
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1.9k
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GEOquery and Limma
limma GEOquery limma GEOquery
updated 14.1 years ago by 21k • written 14.1 years ago by ▴ 760
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1
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2.5k
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Problem with a specific GEO dataset.
GEOquery GEOquery
updated 14.1 years ago by 21k • written 14.1 years ago by ★ 13k
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4
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2.5k
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GEO and Limma
limma GEOquery limma GEOquery
14.1 years ago Voke AO ▴ 760
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6
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2.5k
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GEOquery and GSE error
GEOquery GEOquery
updated 14.2 years ago by 21k • written 14.2 years ago by ▴ 760
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1.3k
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problem in read in file with GEOquery library
hgu133a GEOquery hgu133a GEOquery
14.2 years ago Sean Davis 21k
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3
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1.6k
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Combining GEOquery with samr or siggenes
siggenes GEOquery siggenes GEOquery
14.2 years ago Voke AO ▴ 760
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0
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1.3k
views
problem in read in file with GEOquery library
hgu133a GEOquery hgu133a GEOquery
14.2 years ago Zhe Liu ▴ 90
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0
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1.3k
views
topTable (fit) annotation
Annotation GO Homo sapiens annotate limma GEOquery Annotation GO Homo sapiens annotate
14.2 years ago Jing Huang ▴ 380
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2
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2.3k
views
GEOquery package
GEOquery GEOquery
updated 14.2 years ago by ▴ 150 • written 14.2 years ago by ▴ 380
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1.2k
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FW: GEOquery package
Normalization GEOquery Normalization GEOquery
14.2 years ago Ochsner, Scott A ▴ 60
2
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6
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11k
views
GEOquery: how to extract experimental data? (confused)
PROcess GEOquery PROcess GEOquery
updated 14.3 years ago by ▴ 60 • written 14.3 years ago by ★ 1.9k
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2
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1.2k
views
Regarding GEOquery
GEOquery GEOquery
updated 14.5 years ago by ▴ 20 • written 14.5 years ago by ▴ 40
0
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1
reply
2.1k
views
How to extract Phenotype data from GSE
GEOquery GEOquery
updated 14.5 years ago by ▴ 610 • written 14.5 years ago by ▴ 30
0
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1
reply
842
views
Regarding GEOqury
GEOquery GEOquery
updated 14.6 years ago by 21k • written 14.6 years ago by ▴ 570
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1
reply
1.2k
views
Help for GEOquery installation on window 7
GEOquery GEOquery
updated 14.6 years ago by 21k • written 14.6 years ago by ▴ 30
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1
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1.4k
views
Error in installing packages from bioconductor using R version 2.13.0 on Windows 7
GEOquery GEOquery
updated 14.6 years ago by ★ 8.2k • written 14.6 years ago by ▴ 80
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4
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1.4k
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stuck in biocLite("GEOquery")
GEOquery GEOquery
updated 14.7 years ago by ★ 8.2k • written 14.7 years ago by ▴ 450
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0
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693
views
Question about
Biobase GEOquery Biobase GEOquery
14.7 years ago Sean Davis 21k
0
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2
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3.8k
views
GEOquery -> cannot open URL 'ftp://ftp.ncbi.nih.gov/pub/geo/DATA/SeriesMatrix/ ....
KEGGSOAP GEOquery KEGGSOAP GEOquery
updated 14.8 years ago by 21k • written 14.8 years ago by ▴ 340
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1
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1.8k
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GEOquery GSElimits
GEOquery GEOquery
updated 14.9 years ago by 21k • written 14.9 years ago by ▴ 610
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2
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1.5k
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GEOquery error
convert GEOquery convert GEOquery
updated 15.0 years ago by 21k • written 15.0 years ago by ▴ 570
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1
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1.6k
views
GEOquery
GEOquery GEOquery
updated 15.0 years ago by 21k • written 15.0 years ago by ▴ 10
0
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7
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3.0k
views
Getting annotation into eset
limma GEOquery limma GEOquery
updated 15.1 years ago by 21k • written 15.1 years ago by ▴ 120
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6
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2.3k
views
Puma question
cdf GEOquery puma cdf GEOquery puma
15.1 years ago Manca Marco PATH ▴ 340
0
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0
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783
views
GEOquery question
GEOquery GEOquery
15.1 years ago Sean Davis 21k
0
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0
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855
views
help about the GEOquery, Thanks.
GEOquery GEOquery
15.1 years ago Sean Davis 21k
0
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2
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2.9k
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Geoquery problem - GSE file
GEOquery GEOquery
15.1 years ago S T ▴ 90
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1
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1.1k
views
How to get all qualified GEO Platform records in R
hgu133a GEOquery hgu133a GEOquery
updated 15.2 years ago by 21k • written 15.2 years ago by ▴ 240
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5
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2.8k
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downloading different kinds of microarray data
Sequencing Microarray Genetics Annotation gpls convert GEOquery GEOmetadb Sequencing gpls
updated 15.3 years ago by ▴ 30 • written 15.3 years ago by 21k
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1
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1.6k
views
downloading different kinds of microarray data
Genetics GEOquery Genetics GEOquery
updated 15.3 years ago by 21k • written 15.3 years ago by ▴ 30
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0
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1.4k
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GEOquery error when parsing Agilent annotation (?)
Annotation GEOquery oligo Annotation GEOquery oligo
15.5 years ago Axel Klenk ★ 1.1k
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2
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1.2k
views
Bioconductor GEOquery package error
GEOquery GEOquery
updated 15.6 years ago by 21k • written 15.6 years ago by ▴ 20
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0
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970
views
Ph.D- Help
GEOquery GEOquery
15.6 years ago Sean Davis 21k
0
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4
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4.7k
views
GEOquery
convert GEOquery convert GEOquery
updated 15.7 years ago by 21k • written 15.7 years ago by ★ 4.3k
3
votes
1
reply
8.5k
views
Annotation for a GEO data set
Annotation annotate GEOquery Annotation annotate GEOquery
updated 15.7 years ago by 21k • written 15.7 years ago by ▴ 20
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3
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1.9k
views
GEOquery not working, NCBI changes?
GEOquery GEOquery
updated 15.7 years ago by 21k • written 15.7 years ago by ▴ 110
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0
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1.6k
views
GEOquery question -- suppressing download for GPL queries?
Annotation GEOquery GEOmetadb Annotation GEOquery GEOmetadb
15.7 years ago Sean Davis 21k
0
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0
replies
2.0k
views
getGEO problem
aCGH gpls aCGH GEOquery cycle aCGH gpls aCGH GEOquery cycle
15.8 years ago Sean Davis 21k
0
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2
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1.9k
views
a question about using GEOquery
GEOquery GEOquery
updated 15.9 years ago by 21k • written 15.9 years ago by ▴ 30
0
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0
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895
views
error with getGEO;ask for help
Biobase GEOquery Biobase GEOquery
15.9 years ago Sean Davis 21k
0
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2
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2.6k
views
how to get number of samples from GSE with GEOquery
GEOquery GEOquery
updated 15.9 years ago by ▴ 170 • written 15.9 years ago by ★ 1.4k
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4
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1.7k
views
Agi4x44PreProcess
convert GEOquery Agi4x44PreProcess convert GEOquery Agi4x44PreProcess
updated 16.0 years ago by ▴ 460 • written 16.0 years ago by ★ 1.3k
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4
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1.8k
views
Windows binary for GEOquery (R 2.10.0)
GEOquery GEOquery
updated 16.0 years ago by ▴ 450 • written 16.0 years ago by ▴ 50
0
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1
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1.5k
views
(no subject)
Biobase GEOquery Biobase GEOquery
updated 16.0 years ago by ▴ 150 • written 16.0 years ago by ▴ 30
0
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1
reply
1.8k
views
Bioconductor installation for SUSE 11.1
Biobase GEOquery Biobase GEOquery
updated 16.0 years ago by 21k • written 16.0 years ago by ▴ 30
241 results • Page 4 of 5
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Comment: limpa - drivers for unusually high standard error? by Julia Broadbent • 0
Apologies for not being clearer in my initial question, but thank you for answering regardless! The large SE values I am looking at appear …
Answer: limpa - drivers for unusually high standard error? by Gordon Smyth 53k
Hi Julia, I am going to assume that you mean standard errors (SEs) returned by `dpcQuant()`, because later stages in the limpa pipeline do…
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It sounds like AUCell is struggling with thresholding because your cDC2 gene set doesn t show a clear bimodal distribution. While a high AU…
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FeatureCounts can behave differently with ONT cDNA BAM files due to long read splice patterns, and many users compare settings or presets m…
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For gamers facing technical issues or errors in complex scripts, the Redz Hub script download provides a reliable tool to optimize performa…
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Answer: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Post translational modifications and phosphoproteomics in limpa?
Answer: Post translational modifications and phosphoproteomics in limpa?
Answer: Identifying differentially expressed genes in individual samples from a large co
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