Bioconductor InteractionSet

Showing : InteractionSet • reset

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645

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InteractionSet GInteractions

3 months ago Sarah ▴ 10

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1.3k

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diffhic interactionset

7.7 years ago Vivek.b ▴ 100

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1.2k

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diffhic hic interactionset contactmatrix inflate

updated 6.5 years ago by Aaron Lun ★ 28k • written 6.5 years ago by hwick1 ▴ 20

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1.3k

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interactionset granges

updated 5.8 years ago by Aaron Lun ★ 28k • written 5.8 years ago by Vinicius Henrique da Silva ▴ 40

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1.2k

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genomicinteractions gviz interactionset

updated 5.4 years ago by liz.ingsimmons ▴ 140 • written 5.4 years ago by ferbecneu • 0

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825

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diffHic HiC InteractionSet

updated 4.0 years ago by Aaron Lun ★ 28k • written 4.0 years ago by girardot • 0

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831

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S4 Rcpp InteractionSet IRanges Rle

updated 3.9 years ago by Aaron Lun ★ 28k • written 3.9 years ago by lklei001 • 0

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997

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InteractionSet

2.8 years ago noag • 0

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1.0k

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DEGcomparison DESeq2 InteractionSet pvalue

9 weeks ago • updated 8 weeks ago paria.alipour • 0

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1.0k

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InteractionSet structural variants

updated 7.7 years ago by Aaron Lun ★ 28k • written 7.7 years ago by tangming2005 ▴ 190

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757

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InteractionSet BuildReport

15 months ago martin.grigorov ▴ 10

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399

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InteractionSet subsetByOverlaps GenomicInteractions

9 months ago LaureTomas ▴ 10

12 results • Page 1 of 1

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Comment: Opposite sign of LFC in count plots of DEGs (DESeq2) by winwater0928 • 0

Thank you for your comment! I'll review my code from top to bottom.

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

So basically you are using HTML markup to set your subscripts and whatnot, and then `element_markdown` does the rest.

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

Oh snap. Foiled again. Here it is with spaces & ge ; and & lt ;

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

Oh LOL. My markdown got edited by the markdown editor! What is between the p and 50 in the first case is the HTML for greater than or equal…

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

Ah, good point. You could instead try ``` > library(ggtext) > keyvals.shape = c(rep(3,10), rep(2,8)) > names(keyvals.shape) = ifelse(keyva…

Votes

Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)

biomaRt error: database disk image is malformed

Comment: biomaRt : No lock file for BiocFileCache

Answer: Cross-species analysis - how to compute the mid parent value?

Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2

Awards • All

Scholar to James W. MacDonald 65k

Supporter to JKim • 0