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119
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updated 7 days ago by
Gordon Smyth
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14
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17
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1.0k
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181
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10 days ago • updated 8 days ago
catv
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150
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Gordon Smyth
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written 12 days ago by
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277
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13 days ago • updated 7 days ago
hortense96
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3
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334
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Gordon Smyth
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2
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6
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371
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153
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updated 24 days ago by
Gordon Smyth
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written 24 days ago by
avery
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4
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296
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24 days ago • updated 23 days ago
andrea.rodriguez-martinez13
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178
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25
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841
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updated 28 days ago by
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written 9.8 years ago by
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Answer: Timecourse RNASeq analysis
by
Michael Love
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There are many choices for time course, and we have an example in our workflow (rnaseqGene).
Otherwise, I recommend to consult a local …
Answer: Padj "NA" with thousands of low count although the raw read counts are quite lar
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Michael Love
41k
You can either turn off independent filtering in `results` or use `ihw` see the vignette.
Comment: Why p value inconsistent when using different number of pathway score?
by
Chris
•
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Thanks Gordon for a detail guide! Seem you track time of everything.
Answer: Version 3.15 S4Vectors packages are missing
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shepherl
3.8k
It is missing because that package did not have any updates in the release except for the initial version. The archive directory holds prev…
Answer: putting my own expression data in deseq2
by
ATpoint
★
4.1k
> directly from GEOquery
I can tell you that GEOquery retrieves array data not appropriate for DESeq2. For anything else make your questi…
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