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MotifbreakR
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0
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Is there a function that takes an amino acid string and returns all biologically possible substitutions?
Biostrings
aminoacid
motifbreakR
written 7 months ago by
wilson_ava
• 0
0
votes
0
replies
1.2k
views
motifBreakR error with custom BSgenome
GenomeInfoDb
motifbreakR
3.9 years ago
Chris Seidel
▴ 80
0
votes
0
replies
1.1k
views
How are the MotifbreakR scores calculated, and how do they relate to one another?
MotifbreakR
R
motifs
5.9 years ago
camerond
• 0
2
votes
5
replies
3.0k
views
Error with R package motifbreakR while trying to read a vcf file with snps.from.file function
motifbreakR
vcf
snps
motif analysis
updated 6.8 years ago by
Valerie Obenchain
★ 6.8k • written 6.8 years ago by
svlachavas
▴ 840
0
votes
0
replies
1.1k
views
Motif Breaker error
bioconductor
motifbreakr
plotmb
7.3 years ago
priyankaraina10
• 0
0
votes
2
replies
1.4k
views
motifbreakR VariantAnnotation namespace error on reading vcf file
motifbreakR
variantannotation
updated 9.4 years ago by
Simon Coetzee
▴ 50 • written 9.4 years ago by
ashley.doane
▴ 20
6 results • Page
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Comment: Package developing and interoperation with Bioconductor
by
shepherl
4.1k
Using an example with SummarizedExperiment would satisfy the requirement; however the package should take the object directly and not just…
Comment: Error in H5Dclose(h5dataset) when trying to read in kallisto h5 files
by
Sofia
• 0
1. I have tried to update the packages and R but to no avail. I keep getting either this error or : `Error in H5Fclose(file$H5Identifier) …
Comment: Validity of SingleR with very small bulk RNAseq reference
by
Rohit
• 0
Hi @nhaus So, what did you end up doing in such a scenario? I am facing a similar challenge
Comment: CpGs with genomic positions greater than the chromosome size in EPICv2?
by
Joshua Llano
• 0
Thank you for your reply James. I was worried that it was my mistake.
Comment: Annotation package for Manduca sexta
by
GA
▴ 10
Thank you!
Votes
Answer: CpGs with genomic positions greater than the chromosome size in EPICv2?
Answer: Explannation for ROAST results
A: How DiffBind run PCA based on peak data?
Looking for equivalent EPIC chip v1 vs. v2 annotation variables
Properly constructing a hypergeometric test
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