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Maximum parsimony protein assembly/inference
rforproteomics
proteomics
msnid
msnbase
4.6 years ago
daniel.magnus.bader
▴ 50
4
votes
5
replies
2.3k
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How to convert a xlsx data file to MSnSet format?
msnbase
msmstests
proteomics
lc-ms/ms
msnID
updated 5.8 years ago by
Laurent Gatto
1.6k • written 5.8 years ago by
fgol
▴ 10
0
votes
14
replies
2.8k
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Pbase: AddIdentificationData. How can I use MSnId objects (filtered psm) to build the Proteins database
pbase
MsnId
mzid
msnbase
updated 8.7 years ago by
Sebastian Gibb
▴ 80 • written 8.8 years ago by
viswanathan.raghuram
• 0
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Comment: Handling Epic Array Data
by
Melisa Tecik
• 0
Thank you so much for the clarification. As you said the replicates are the cells from different plates. For instance, both R01C01 and R05C…
Answer: Handling Epic Array Data
by
James W. MacDonald
67k
You don't need a sample sheet. It is just a simple way to identify the Idat files and possibly include sample information. But you appear t…
Comment: preprocessIllumina error with EPICv2 array
by
Rakesh
• 0
Amazing, thanks for the help!
Answer: Allele frequencies for ALL alleles of one SNP ?
by
Robert Castelo
★ 3.4k
Hi, the [GenomicScores](https://bioconductor.org/packages/GenomicSCores) package provides supporting infrastructure to create annotation re…
Answer: preprocessIllumina error with EPICv2 array
by
James W. MacDonald
67k
You shouldn't need to change the annotation, and certainly not like that. You should never need to use the `@` function directly - there ar…
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Answer: preprocessIllumina error with EPICv2 array
Answer: preprocessIllumina error with EPICv2 array
Answer: UniProt.ws query loading indefinitely
Answer: Package needs internet access
Answer: Using voom-transformed counts for unsupervised analyses (PCA, Random Forest, Ela
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