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Ontology
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4
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5.7k
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Is there any description available for KEGG Pathway Edge Types
KEGG
SystemsBiology
KEGGgraph
ontology
3.4 years ago
Wuschel
▴ 10
3
votes
3
replies
2.0k
views
Discrepancies between topGO output and input
go
topGO
gene
ontology
enrichment
updated 6.7 years ago by
James W. MacDonald
68k • written 6.7 years ago by
t.bergmann
• 0
3
votes
3
replies
1.7k
views
source of GO ontology and GO annotations in Bioconductor for GO.db
GO
ontology
GO.db
updated 7.5 years ago by
apkmirrorproject
• 0 • written 7.5 years ago by
marcinjoachimiak
▴ 10
1
vote
0
replies
1.5k
views
adjusted p-values with topGO elim.KS method
topGO
Ontology
DifferentialExpression
3.4 years ago
Kevin Gregory
▴ 10
1
vote
5
replies
2.3k
views
Gene Ontology analysis
ontology
edger
limma
ncbi
organism package
updated 6.0 years ago by
Gordon Smyth
53k • written 6.0 years ago by
babak.loghmani
▴ 20
1
vote
1
reply
1.6k
views
News:
Gene Ontology Official Workshop - Montreal, October 16, 2018
gene ontology
go
ontology
bioinformatics
genomics
News
7.4 years ago
laurent.albou
• 0
1
vote
2
replies
1.2k
views
gene ontologies for a set of genes
gene
ontology
4.6 years ago
Bogdan
▴ 670
7 results • Page
1 of 1
Recent ...
Replies
Answer: GSEA error
by
James W. MacDonald
68k
At a very high level, the way non-model organisms are annotated is by using blast to find orthologs in other species that are well annotate…
Comment: Unable to find ENTREZ IDs
by
Adithi
• 0
Hi James, Thank you so much for your reply. My main goal is to find ortholog genes from chinese hamster gene symbols to mouse gene symbols…
Comment: Unable to find ENTREZ IDs
by
Adithi
• 0
Hi James, Thank you so much for your reply. My main goal is to find ortholog genes from chinese hamster gene symbols to mouse gene symbols…
Answer: Unable to find ENTREZ IDs
by
James W. MacDonald
68k
Those are the 'symbols', and are a concatenation of LOC and the NCBI Gene ID (what used to be called an Entrez Gene ID). As an example:http…
Answer: Inconsistencies between accessor functions for TxDb databases with selected seql
by
a2a2hd42aa
• 0
Technical inconsistencies in database accessors can disrupt your workflow, but finding a reliable source to download online mobile games sh…
Votes
Answer: GSEA error
Answer: OrgDb for maize
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
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