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Showing :
Ontology
•
reset
4
votes
2
replies
2.0k
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Is there any description available for KEGG Pathway Edge Types
KEGG
SystemsBiology
KEGGgraph
ontology
19 months ago
Wuschel
▴ 10
3
votes
3
replies
1.2k
views
Discrepancies between topGO output and input
go
topGO
gene
ontology
enrichment
updated 4.9 years ago by
James W. MacDonald
66k • written 4.9 years ago by
t.bergmann
• 0
3
votes
3
replies
1.1k
views
source of GO ontology and GO annotations in Bioconductor for GO.db
GO
ontology
GO.db
updated 5.7 years ago by
apkmirrorproject
• 0 • written 5.7 years ago by
marcinjoachimiak
▴ 10
1
vote
0
replies
804
views
adjusted p-values with topGO elim.KS method
topGO
Ontology
DifferentialExpression
20 months ago
Kevin Gregory
▴ 10
1
vote
5
replies
1.3k
views
Gene Ontology analysis
ontology
edger
limma
ncbi
organism package
updated 4.2 years ago by
Gordon Smyth
50k • written 4.2 years ago by
babak.loghmani
▴ 20
1
vote
1
reply
1.2k
views
News:
Gene Ontology Official Workshop - Montreal, October 16, 2018
gene ontology
go
ontology
bioinformatics
genomics
News
5.6 years ago
laurent.albou
• 0
1
vote
2
replies
741
views
gene ontologies for a set of genes
gene
ontology
2.8 years ago
Bogdan
▴ 670
7 results • Page
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Recent ...
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Comment: Ensembl plants at annotationHub?
by
Daniele
• 0
Thank you so much!
Answer: recount3 problem downloading data from source sra
by
Leonardo Collado Torres
★ 1.0k
Hi, I wasn't able to reproduce the issue on both bioc 3.19 (current release version) and 3.18 (closer to your session info). My guess is…
Answer: Running ENmix with mouse methylation manifest: readidat error - Error in readman
by
minardsmitha
▴ 10
Well it turns out there is a typo in the manifest file name. This particular issue is resolved by correcting the typo. A new error now …
Answer: Documenting resources in an `ExperimentHub` package?
by
James W. MacDonald
66k
The easiest way to do that IMO is to use emacs/ESS (or I believe there is some newfangled thing called RStudio? Not personally familiar, bu…
Comment: ChAMP installation issue
by
shepherl
3.9k
We are still waiting for the goseq to respond to our requests but will take action next week if it is not resolved. ChAMP is currently una…
Votes
Answer: Identifying DEGs using limma - NanoString GeoMx-NGS RNA Expression Data
Comment: Ensembl plants at annotationHub?
how to control age and gender effect in expression data using DESeq2
Answer: Error retrieving ensembl gene id using biomaRt...
Comment: LRT, more than two conditions and pairwise comparisons
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