Showing : R update • reset
0
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4
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2.8k
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Biocgenerics updating problem on ubuntu 17.10
bioconductor biocgenerics ubuntu package updates r update
8.1 years ago siinemselvi • 0
3
votes
3
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4.3k
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problem reinstalling Bioconductor package 'clusterProfiler' after updating R to 3.4.0
clusterprofiler package installation r update
updated 8.6 years ago by ▴ 10 • written 8.6 years ago by ▴ 10
2
votes
1
reply
5.0k
views
Upgrade to Bioconductor 3.4 - problems with R
r update upgrade bioclite
updated 9.1 years ago by 68k • written 9.1 years ago by • 0
0
votes
2
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2.1k
views
package ‘virtualArray’ is not available (for R version 3.2.1)
r update
updated 10.4 years ago by 25k • written 10.4 years ago by • 0
3
votes
11
replies
7.3k
views
Problems getting Bioc 3.1 after upgrade to R_3.2.0
biocinstaller r update
10.7 years ago meeta.mistry ▴ 30
3
votes
11
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15k
views
Problems updating Bioconductor with R 3.2.0
upgrade r update
updated 10.7 years ago by ★ 8.2k • written 10.7 years ago by ▴ 10
2
votes
2
replies
2.3k
views
R 3.1.1 - Update error
R update
updated 11.1 years ago by 68k • written 11.1 years ago by ▴ 10
7 results • Page 1 of 1
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Comment: segfault in edgeR glmQLFit by Gordon Smyth 53k
We have committed a bug fix now to edgeR on both the release and developmental Bioconductor repositories.
Answer: Ensembl site unresponsive via biomaRt by horaortiz8 • 0
I appreciate the link. I'll get in touch with them directly; I wish they had a status page of some kind. https://www.ensembl.org/Help/Cont…
Comment: segfault in edgeR glmQLFit by Mark • 0
Thanks! We had been considering some of these adjustments as well, given the small number of features and total reads. Your advice is well-…
Answer: DESeq2 - how many surrogate variables from svaseq, use of lfcshrink by ATpoint ★ 5.0k
> and I first used the normalized counts You would not use these normalized counts for PCA as they're not on log2 scale. As such, the feat…
Comment: EuroBioC2026 abstract submission is open! by TikTsokaasocissalpc • 0
Submitting abstracts for EuroBioC2026 can be exciting but organizing ideas is key. A Random Word Generator [visit][1] can help create uniqu…
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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