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SNP
•
reset
0
votes
1
reply
1.4k
views
(CRLMM) an issue needs to be clarified
SNP
affy
crlmm
SNP
affy
crlmm
16.7 years ago
Ping-Hsun Hsieh
▴ 30
0
votes
2
replies
1.1k
views
biomart package - error querying for ensembl gene ID in snp mart
SNP
biomaRt
SNP
biomaRt
16.7 years ago
Rhoda Kinsella
▴ 660
0
votes
0
replies
786
views
biomart package - error querying for ensembl gene ID in snp mart
SNP
biomaRt
SNP
biomaRt
16.7 years ago
martin sikora
▴ 60
0
votes
3
replies
1.5k
views
biomart package - error querying for ensembl gene ID in snp mart
SNP
biomaRt
SNP
biomaRt
16.7 years ago
martin sikora
▴ 60
0
votes
0
replies
1.7k
views
About the bioconductor package SNPlocs.Hsapiens.dbSNP.20071016.
SNP
Cancer
SNPlocs
SNP
Cancer
SNPlocs
16.8 years ago
Hervé Pagès
16k
0
votes
3
replies
1.7k
views
Problem with justSNPRMA, library "oligo"
SNP
HapMap
SNP
HapMap
16.8 years ago
alessio boattini
▴ 30
0
votes
0
replies
1.3k
views
qPCR 2009 Event Agenda Online
SNP
qPCR
Normalization
Visualization
Regression
Cancer
probe
microRNA
SNP
qPCR
Cancer
16.8 years ago
qPCR Platform - the reference in real-t…
▴ 170
0
votes
0
replies
1.4k
views
NEW deadline - Talk & Poster Call - qPCR 2009 Event
SNP
qPCR
Normalization
Visualization
Regression
Cancer
probe
microRNA
SNP
qPCR
Cancer
16.8 years ago
qPCR Platform - the reference in real-t…
▴ 170
0
votes
1
reply
1.0k
views
Does any one know a package that allow command line dChip normalization with a specific median array?
SNP
Normalization
SNP
Normalization
updated 16.9 years ago by
Henrik Bengtsson
★ 2.4k • written 16.9 years ago by
Li, Aiguo NIH/NCI
▴ 110
0
votes
1
reply
1.6k
views
Talk & Poster - Final Call - qPCR 2009 Event
SNP
qPCR
Normalization
Visualization
Regression
Cancer
probe
PROcess
microRNA
SNP
qPCR
16.9 years ago
qPCR Platform - the reference in real-t…
▴ 170
0
votes
1
reply
1.6k
views
A CGH platform question
SNP
Genetics
Coverage
CGH
affy
SNP
Genetics
Coverage
CGH
affy
updated 16.9 years ago by
Henrik Bengtsson
★ 2.4k • written 16.9 years ago by
Johan Lindberg
▴ 70
0
votes
0
replies
1.5k
views
Talk & Poster Call - qPCR 2009 Event
SNP
qPCR
Normalization
Visualization
Regression
Cancer
probe
PROcess
microRNA
SNP
qPCR
17.0 years ago
qPCR Platform - the reference in real-t…
▴ 170
0
votes
2
replies
1.5k
views
biomaRt doesn't load RCurl automatically
SNP
biomaRt
SNP
biomaRt
17.0 years ago
Shi, Tao
▴ 720
0
votes
7
replies
2.0k
views
how to put together 600 files from the 5.0 Affy SNPchip
SNP
SNPchip
SNP
SNPchip
17.0 years ago
Laura Rodriguez Murillo
▴ 60
0
votes
0
replies
1.2k
views
The us of bioConductor to analyze raw and segmented data from TCGA (The Cancer Genome Atlas)
SNP
Cancer
SNP
Cancer
17.1 years ago
Wang, Frank IM, Americas
▴ 10
0
votes
0
replies
1.9k
views
Postdoc positions at the Cancer Research UK Cambridge Research Institute
SNP
Genetics
Pathways
Cancer
CGH
microRNA
SNP
Genetics
Pathways
Cancer
CGH
microRNA
17.1 years ago
Florian Markowetz
▴ 20
0
votes
2
replies
1.6k
views
Getting dChip SNP intensity in BioC?
SNP
oligo
SNP
oligo
updated 17.1 years ago by
Henrik Bengtsson
★ 2.4k • written 17.1 years ago by
Jeff Gentry
★ 3.9k
1
vote
0
replies
1.1k
views
SIM new package for Statistical Integration of Microarrays
SNP
Microarray
Visualization
Cancer
SNP
Microarray
Visualization
Cancer
17.2 years ago
Maarten van Iterson
▴ 60
0
votes
0
replies
821
views
Retrieve SNP annotation
SNP
annotate
SNP
annotate
17.2 years ago
Fabio Sanchez
▴ 10
0
votes
2
replies
1.6k
views
LOH analysis for illumina data
SNP
Cancer
Prostate
SNP
Cancer
Prostate
17.2 years ago
Yu Chuan Tai
▴ 440
0
votes
2
replies
1.2k
views
SNP chips
SNP
SNP
updated 17.2 years ago by
marco zucchelli
▴ 320 • written 17.2 years ago by
Yogi Sundaravadanam
▴ 320
0
votes
1
reply
1.0k
views
smlSet and snpMatrix / copy number analysis
SNP
GGtools
SNP
GGtools
updated 17.3 years ago by
Vincent J. Carey, Jr.
6.7k • written 17.3 years ago by
Nathan Harmston
▴ 100
0
votes
1
reply
1.1k
views
Question about Affymetrix High-density SNP arrays
SNP
SNP
updated 17.3 years ago by
Sean Davis
21k • written 17.3 years ago by
affy snp
▴ 640
0
votes
0
replies
841
views
Help in BioMart
SNP
biomaRt
SNP
biomaRt
17.3 years ago
steffen@stat.Berkeley.EDU
▴ 600
0
votes
0
replies
1.1k
views
how to get oligoSnpSet object?
SNP
oligo
SNP
oligo
17.3 years ago
Yupu Liang
▴ 50
0
votes
2
replies
1.4k
views
CGH-like workflow for Affymetrix SNP 500k
aCGH
SNP
Cancer
DNAcopy
aCGH
aCGH
SNP
Cancer
DNAcopy
aCGH
updated 17.4 years ago by
Henrik Bengtsson
★ 2.4k • written 17.4 years ago by
Daniel Brewer
★ 1.9k
0
votes
3
replies
1.6k
views
snpMatrix - Creating a 1-column snp.matrix by subsetting a larger snp.matrix
SNP
SNP
17.4 years ago
Richard Pearson
▴ 390
0
votes
2
replies
1.5k
views
Problems with oligo and pd.genomewidesnp.6
SNP
Annotation
HapMap
SNP
Annotation
HapMap
updated 17.5 years ago by
Vincent J. Carey, Jr.
6.7k • written 17.5 years ago by
Jeremy Silver
▴ 10
0
votes
3
replies
1.3k
views
aCGH package - performance Issues
SNP
Cancer
SNP
Cancer
17.5 years ago
Julian Lee
▴ 140
0
votes
1
reply
1.6k
views
BioC 2.2 now available
SNP
Microarray
Genetics
Annotation
Preprocessing
Bayesian
Clustering
Infrastructure
Cancer
updated 17.5 years ago by
Patrick Aboyoun
★ 1.6k • written 17.5 years ago by
Martin Morgan
25k
0
votes
0
replies
1.1k
views
Package for Illumina Human CNV 370 data
SNP
SNP
17.6 years ago
Tapan Mehta
▴ 270
0
votes
2
replies
907
views
info on chunkwise analysis
SNP
SNP
updated 17.6 years ago by
Henrik Bengtsson
★ 2.4k • written 17.6 years ago by
weiliang Qiu
▴ 60
0
votes
0
replies
1.1k
views
major alterations to GGdata/GGtools planned
SNP
snpMatrix
cycle
SNP
snpMatrix
cycle
17.6 years ago
Vincent J. Carey, Jr.
6.7k
0
votes
0
replies
1.5k
views
BioConductor Developer Workshop Lausanne 2008 Info
SNP
Annotation
annaffy
AnnBuilder
biomaRt
cellHTS2
SNP
Annotation
annaffy
AnnBuilder
17.7 years ago
Darlene Goldstein
▴ 230
0
votes
0
replies
1.5k
views
Bioconductor training course, Boston March 5-6-7 2008
aCGH
SNP
Genetics
Annotation
GO
Visualization
affy
limma
aCGH
MLInterfaces
Category
SNP
17.8 years ago
Vincent J. Carey, Jr.
6.7k
0
votes
0
replies
859
views
ways to measure runs of homozygosity?
SNP
affy
SNP
affy
17.8 years ago
Matthew Keller
▴ 100
0
votes
1
reply
1.5k
views
Off topic - JOB
SNP
Sequencing
Proteomics
SNP
Sequencing
Proteomics
updated 17.8 years ago by
Lauro Sumoy Van Dyck
▴ 70 • written 17.8 years ago by
Crispin Miller
★ 1.1k
0
votes
1
reply
948
views
Affy 10K SNP arrays
SNP
affy
SNP
affy
updated 18.0 years ago by
James W. MacDonald
68k • written 18.0 years ago by
Aparna Radhakrishnan
▴ 30
0
votes
3
replies
1.6k
views
A question about installation of cghFLasso package
SNP
affy
SNP
affy
updated 18.0 years ago by
Sean Davis
21k • written 18.0 years ago by
affy snp
▴ 640
0
votes
4
replies
1.7k
views
About CLAC package
SNP
affy
SNP
affy
18.0 years ago
affy snp
▴ 640
0
votes
4
replies
1.5k
views
how to read in affy snp 500K arrays
SNP
affy
SNP
affy
updated 18.0 years ago by
Benilton Carvalho
★ 4.3k • written 18.0 years ago by
affy snp
▴ 640
0
votes
0
replies
1.3k
views
Plotting question: how to plot SNP location data?
SNP
SNP
18.0 years ago
Lauri.Nikkinen@veripalvelu.fi
▴ 20
0
votes
1
reply
2.0k
views
Plotting question: how to plot SNP location data?
SNP
SNP
updated 18.0 years ago by
Thomas Girke
★ 1.7k • written 18.0 years ago by
Lauri.Nikkinen@veripalvelu.fi
▴ 20
0
votes
1
reply
1.6k
views
Bioconductor 2.1 is released
SNP
Microarray
SAGE
Annotation
Bayesian
Regression
GUI
CGH
hgu95av2
graph
Rgraphviz
SNP
18.1 years ago
Hervé Pagès
16k
0
votes
7
replies
2.4k
views
segmentation for Affy SNP arrays
SNP
CGH
affy
GLAD
snapCGH
SNP
CGH
affy
GLAD
snapCGH
updated 18.1 years ago by
Rob Scharpf
▴ 250 • written 18.2 years ago by
Yu Chuan Tai
▴ 440
0
votes
1
reply
1.1k
views
chromosome arms missing from Affy's Mapping 500K Array Set SNP chips?
SNP
affy
SNP
affy
updated 18.2 years ago by
Stephanie Mewborn
▴ 40 • written 18.2 years ago by
Wittner, Ben
▴ 290
0
votes
0
replies
919
views
Getting associated genes from SNP anntotation files
SNP
oligo
SNP
oligo
18.2 years ago
Holger Schwender
▴ 900
0
votes
0
replies
979
views
how to get fewer cut points with DNAcopy or GLAD
SNP
affy
DNAcopy
GLAD
SNP
affy
DNAcopy
GLAD
18.3 years ago
Wittner, Ben
▴ 290
0
votes
0
replies
1.5k
views
software for Affymetrix SNP arrays 6.0
SNP
affy
PROcess
SNP
affy
PROcess
18.4 years ago
Yu Chuan Tai
▴ 440
0
votes
3
replies
1.4k
views
Fwd: pmStrand() in oligo (version...)
SNP
oligo
SNP
oligo
18.4 years ago
Benilton Carvalho
★ 4.3k
343 results • Page
6 of 7
Recent ...
Replies
Comment: Save the Date: BioC2026
by
eja.gsssssswwse.r.m
• 0
Que notícia incrivel sobre o BioC2026 Para quem gosta de aproveitar o conteudo online, também e possvel Baixar [snaptube versão antiga][1] …
Comment: Ensembl 115 has been released!
by
eja.gsssssswwse.r.m
• 0
Keeping up with Ensembls latest release ensures access to cutting-edge genomic information. For those balancing research and leisure, a mob…
Answer: After running samtools, the featureCounts command crashed.
by
Kevin Blighe
★ 4.0k
Hi Rui Tang, The "buffer overflow detected" error in featureCounts usually stems from a corrupted or malformed GTF file, often due to tr…
Answer: Problem with the TMB plot
by
Kevin Blighe
★ 4.0k
Hi, The linear TMB plot with no clustering suggests your variant calls may lack sample-specific discrimination, likely due to filtering ap…
Answer: gene Set with high AUC score but no cells assigned to cell type
by
Kevin Blighe
★ 4.0k
Hi, You have correctly identified the issue: AUCell's automatic threshold selection is conservative by design, aiming for specificity to…
Votes
Answer: DESeq2 design for haplotype MPRA
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Suppress warning in RHDF5 write
Answer: Suppress warning in RHDF5 write
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