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how to map affy SNP ID to pubmed ID
SNP Annotation affy SNP Annotation affy
updated 15.1 years ago by ★ 7.2k • written 15.1 years ago by ▴ 110
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Annotation package for affy SNP6.0
SNP probe affy SNP probe affy
15.1 years ago Qian Liu ▴ 110
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4
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1.9k
views
faster way to get differential calls from pileup?
SNP Sequencing PROcess SNP Sequencing PROcess
updated 15.1 years ago by 21k • written 15.1 years ago by ▴ 260
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1
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1.3k
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crlmm package and allele-specific CNV with Illumina SNP arrays
SNP crlmm SNP crlmm
updated 15.1 years ago by ▴ 250 • written 15.1 years ago by ▴ 20
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BioNet - interpretation of node score (Eva Benito Garagorri)
SNP Microarray GO Network Clustering Cancer Organism mgug4122a probe limma convert SNP
15.1 years ago Daniela Beißer ▴ 20
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2
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1.6k
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Question on copy number estimation for Affymetrix SNP array 100k and 500k
SNP crlmm genoCN SNP crlmm genoCN
updated 15.1 years ago by ★ 2.4k • written 15.1 years ago by ★ 4.3k
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3
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1.2k
views
Oligo package crlmm method
SNP oligo crlmm SNP oligo crlmm
updated 15.2 years ago by ★ 4.3k • written 15.2 years ago by ★ 4.3k
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3
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1.1k
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how to open a SNP data file as large as 500M in Windows OR just extract part of data
SNP SNP
updated 15.2 years ago by ▴ 220 • written 15.2 years ago by ▴ 70
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8
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2.5k
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mouse SNPs
SNP Annotation GO HapMap annotate SNP Annotation GO HapMap annotate
15.2 years ago Glazko, Galina ▴ 350
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3
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3.6k
views
meta-analysis with P values
SNP SNP
updated 15.3 years ago by ▴ 970 • written 15.3 years ago by ▴ 60
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3
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2.4k
views
Bioconductor / plotting SNPs, runs of homozygosity
SNP geneplotter SNPchip SNP geneplotter SNPchip
updated 15.3 years ago by 6.7k • written 15.3 years ago by ▴ 40
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2
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1.5k
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SNP chip
SNP convert SNP convert
updated 15.3 years ago by 68k • written 15.3 years ago by ▴ 330
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1
reply
1.3k
views
biomaRt: error using dataset from HapMap_rel27 mart
SNP biomaRt SNP biomaRt
updated 15.4 years ago by ▴ 500 • written 15.4 years ago by ▴ 10
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5
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1.8k
views
crlmm package help for copy number affymetrix snp 6.0
SNP crlmm SNP crlmm
updated 15.4 years ago by ★ 4.3k • written 15.4 years ago by ▴ 60
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0
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1.6k
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R functions for genetic distances
SNP Genetics convert SNP Genetics convert
15.5 years ago Waddell, Peter J ▴ 10
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0
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2.5k
views
Two bioinformatics positions in Bordeaux, France
SNP Sequencing Genetics Cancer Breast SNP Sequencing Genetics Cancer Breast
15.5 years ago Audrey Kauffmann ▴ 110
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2
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1.6k
views
remapping the SNPs in the Affy6.0
SNP Annotation GO affy SNP Annotation GO affy
updated 15.5 years ago by 6.7k • written 15.5 years ago by ▴ 90
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2
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1.6k
views
pulling functional information for SNPs
SNP affy biomaRt rtracklayer SNP affy biomaRt rtracklayer
updated 15.5 years ago by ★ 7.4k • written 15.5 years ago by 68k
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2.1k
views
How to normalize Illumina bead-level data ?
SNP Normalization GO PROcess beadarraySNP SNP Normalization GO PROcess beadarraySNP
15.5 years ago Jonas Mandel ▴ 10
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3
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1.7k
views
beadarray illumina Human610-Quadv1_B.bpm
SNP Annotation illuminaHumanv1 beadarray SNP Annotation illuminaHumanv1 beadarray
updated 15.5 years ago by ★ 1.1k • written 15.5 years ago by ▴ 80
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1
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1.5k
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pulling functional information for SNPs
SNP biomaRt SNP biomaRt
updated 15.5 years ago by 68k • written 15.5 years ago by ▴ 90
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0
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1.1k
views
package to handle Infinium iSelect HD Custom Genotyping
SNP Normalization crlmm SNP Normalization crlmm
15.6 years ago Ramzi TEMANNI ▴ 160
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1
reply
1.1k
views
crlmm and HumanAffy250K SNP
SNP affy SNP affy
updated 15.6 years ago by ★ 4.3k • written 15.6 years ago by ▴ 80
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1
reply
1.1k
views
Interpretation of genotype calls from Oligo crlmm algorithm
SNP oligo crlmm SNP oligo crlmm
updated 15.6 years ago by ★ 4.3k • written 15.6 years ago by ▴ 150
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3
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1.5k
views
smlSet
SNP HapMap GGtools SNP HapMap GGtools
updated 15.6 years ago by 6.7k • written 15.6 years ago by ▴ 30
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2
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893
views
Tools for comparing microarray data on a snp level
SNP cdf SNP cdf
updated 15.7 years ago by 21k • written 15.7 years ago by ▴ 40
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0
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1.4k
views
SNP plotter package
SNP SNP
15.7 years ago Kay Jaja ▴ 90
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1.4k
views
Ensembl mart release 57: Useful information
SNP GO Homo sapiens zebrafish SNP GO Homo sapiens zebrafish
15.7 years ago Rhoda Kinsella ▴ 660
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2
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1.5k
views
Strange output in GenABEL convert.snp.ped()
SNP HapMap SNP HapMap
updated 15.8 years ago by 25k • written 15.8 years ago by ★ 1.3k
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909
views
SNP/GWAS - snp id to Pubmed ID through dbSNP
SNP SNP
15.8 years ago Paul Evans ▴ 180
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3
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1.9k
views
getBM no connection but listMarts has
SNP biomaRt Vega SNP biomaRt Vega
updated 15.9 years ago by 68k • written 15.9 years ago by ▴ 370
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1
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2.0k
views
getBM function in biomaRt
SNP GO hgu133a SNP GO hgu133a
updated 16.0 years ago by ▴ 600 • written 16.0 years ago by ★ 1.1k
0
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1
reply
937
views
Illumina 660W or 220K Analysis?
SNP SNP
updated 16.0 years ago by 6.7k • written 16.0 years ago by ▴ 10
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12
replies
3.5k
views
SNP Analysis
SNP SNP
updated 16.1 years ago by ▴ 90 • written 16.1 years ago by ▴ 50
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1
reply
1.3k
views
Plot SNP -log10 pvalues vs chromosomal position
SNP SNP
updated 16.1 years ago by 6.7k • written 16.1 years ago by ▴ 180
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1.0k
views
Custom CDF Version 12 is released
SNP cdf SNP cdf
16.3 years ago Manhong Dai ▴ 200
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1.1k
views
Illumina 610 Quad SNP chips
SNP Cancer Colon SNP Cancer Colon
16.4 years ago Dmitri Mouradov ▴ 20
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1.0k
views
Job Posting: Biostatistician
SNP Microarray SNP Microarray
16.4 years ago Aimee Picard ▴ 10
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0
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916
views
Does CRLMM uses mismatched features?
SNP probe crlmm SNP probe crlmm
16.4 years ago mcoyne@boninc.com ▴ 50
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3
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1.8k
views
Error: All CEL files must be of the same type when running CRLMM
SNP crlmm SNP crlmm
updated 16.4 years ago by 6.7k • written 16.4 years ago by ▴ 50
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0
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776
views
build a chromLocation object for SNP locations, not genes
SNP hu6800 SNP hu6800
16.4 years ago Paul Shannon ★ 1.1k
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1.7k
views
SNPs in High Linkage Disequilibrium
SNP HapMap SNP HapMap
16.4 years ago palermogp@libero.it ▴ 10
0
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1
reply
3.2k
views
How to find SNP names
SNP Homo sapiens SNPlocs SNP Homo sapiens SNPlocs
updated 16.4 years ago by 16k • written 16.4 years ago by ▴ 90
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0
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1.5k
views
Simple beadarraySNP analysis
SNP Normalization Cancer Colon PROcess beadarraySNP copynumber SNP Normalization Cancer
16.5 years ago Dmitri Mouradov ▴ 20
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1
reply
1.8k
views
problems of GenABEL
SNP SNP
updated 16.5 years ago by 6.7k • written 16.5 years ago by ▴ 30
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0
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1.6k
views
Question about using oligo and SNPchip for copy number analysis
SNP Cancer graph oligo SNPchip oligoClasses VanillaICE crlmm SNP Cancer graph oligo
16.5 years ago Min-Han Tan ▴ 40
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3
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2.1k
views
readChp (affxparser) segfaults
SNP cdf affxparser SNP cdf affxparser
updated 16.5 years ago by ★ 6.5k • written 16.5 years ago by ▴ 60
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2
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1.4k
views
Question regarding Affy SNP 5.0/BI_SNP arrays
SNP Annotation cdf affy PROcess oligo SNP Annotation cdf affy PROcess oligo
updated 16.5 years ago by ▴ 40 • written 16.5 years ago by ▴ 120
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0
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1.2k
views
New microRNA & qPCR workshop in April 2009
SNP qPCR Normalization Regression microRNA SNP qPCR Normalization Regression microRNA
16.6 years ago qPCR Platform - the reference in real-t… ▴ 170
0
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1
reply
1.0k
views
Using as.geneSet in GeneticsBase - problems with gene.columns
SNP SNP
updated 16.6 years ago by ▴ 60 • written 16.7 years ago by ▴ 20
343 results • Page 5 of 7
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Comment: Save the Date: BioC2026 by eja.gsssssswwse.r.m • 0
Que notícia incrivel sobre o BioC2026 Para quem gosta de aproveitar o conteudo online, também e possvel Baixar [snaptube versão antiga][1] …
Comment: Ensembl 115 has been released! by eja.gsssssswwse.r.m • 0
Keeping up with Ensembls latest release ensures access to cutting-edge genomic information. For those balancing research and leisure, a mob…
Answer: After running samtools, the featureCounts command crashed. by Kevin Blighe ★ 4.0k
Hi Rui Tang, The "buffer overflow detected" error in featureCounts usually stems from a corrupted or malformed GTF file, often due to tr…
Answer: Problem with the TMB plot by Kevin Blighe ★ 4.0k
Hi, The linear TMB plot with no clustering suggests your variant calls may lack sample-specific discrimination, likely due to filtering ap…
Answer: gene Set with high AUC score but no cells assigned to cell type by Kevin Blighe ★ 4.0k
Hi, You have correctly identified the issue: AUCell's automatic threshold selection is conservative by design, aiming for specificity to…
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