Bioconductor Splatter

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splatter Splatter

updated 5.2 years ago by luke.zappia ▴ 50 • written 5.2 years ago by chenxofhit • 0

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2.3k

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scran scater splatter normalization

updated 6.5 years ago by davis ▴ 90 • written 6.5 years ago by wt215 • 0

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1.3k

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splatter single cell

6.1 years ago nikolaspapadop ▴ 10

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2.0k

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installation splatter

7.0 years ago luke.zappia ▴ 50

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1.7k

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splatter singlecellexperiment scater

6.1 years ago luke.zappia ▴ 50

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893

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splatter biocmanager

written 3.1 years ago by Tianyu • 0

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945

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splatter

5.5 years ago Brian Haas ▴ 90

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843

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SingleCellExperiment splatter

2.5 years ago Fatima • 0

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967

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SingleCellData splatter

updated 2.0 years ago by luke.zappia ▴ 50 • written 2.0 years ago by Fatima • 0

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916

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splatter

6.9 years ago luke.zappia ▴ 50

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1.1k

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splatter

6.5 years ago luke.zappia ▴ 50

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1.1k

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splatter

6.5 years ago luke.zappia ▴ 50

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883

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splatter

6.1 years ago luke.zappia ▴ 50

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970

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splatter simulation

6.0 years ago luke.zappia ▴ 50

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652

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splatter

updated 4.6 years ago by luke.zappia ▴ 50 • written 4.6 years ago by jp3770 • 0

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727

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splatter

updated 3.7 years ago by luke.zappia ▴ 50 • written 3.7 years ago by olympia.hardy13 • 0

16 results • Page 1 of 1

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Answer: Method to find pathways different between 2 groups by Gordon Smyth 50k

> When I search camera limma on pubmed, I found 2 papers I am unclear what point you are trying to make. limma's camera method has been fo…

Comment: package goseq seems to be not available on the latest version of R by Gordon Smyth 50k

limma most certainly is available. It installs in R 4.4.0 and Bioc 3.19 for all platforms without any issues. It has not had any period of …

Comment: package goseq seems to be not available on the latest version of R by Patrycja ▴ 20

limma package also isn't available.Is there any information when these packages will be available?

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 41k

Check the number of bootstrapped data per chromosome compared to the original, and then you can also look at its distribution. For this it'…

Comment: DNAString: Standard checksum function? by Henrik Bengtsson ★ 2.4k

For completeness: SEGUID v2 (https://www.seguid.org/), implemented in CRAN package **[seguid](https://cran.r-project.org/package=seguid)*…

Votes

Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-

Handling multiple differential expression comparisons

Answer: fgsea significant result

package goseq seems to be not available on the latest version of R

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Scholar to ATpoint ★ 4.1k