Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
Splatter
•
reset
5
votes
2
replies
1.7k
views
Accessing normalized counts
splatter
singlecellexperiment
scater
6.1 years ago
luke.zappia
▴ 50
4
votes
2
replies
945
views
Splatter: simulating fold changes for specific genes?
splatter
5.5 years ago
Brian Haas
▴ 90
3
votes
3
replies
2.3k
views
is SCEset fully abandoned in scran?
scran
scater
splatter
normalization
updated 6.5 years ago by
davis
▴ 90 • written 6.5 years ago by
wt215
• 0
2
votes
3
replies
1.3k
views
splatter simulating paths
splatter
single cell
6.1 years ago
nikolaspapadop
▴ 10
1
vote
1
reply
970
views
Any pointers on simulating cell outliers?
splatter
simulation
6.0 years ago
luke.zappia
▴ 50
1
vote
2
replies
843
views
Splatter: which parameters can cause individual variability( expression levels of genes should change across samples)
SingleCellExperiment
splatter
2.5 years ago
Fatima
• 0
0
votes
1
reply
652
views
change values on Differential Expression parameters
splatter
updated 4.6 years ago by
luke.zappia
▴ 50 • written 4.6 years ago by
jp3770
• 0
0
votes
1
reply
727
views
DE analysis packages not detecting Splat DE simulated genes
splatter
updated 3.7 years ago by
luke.zappia
▴ 50 • written 3.7 years ago by
olympia.hardy13
• 0
0
votes
2
replies
893
views
I cannot install the splatter on colab
splatter
biocmanager
written 3.1 years ago by
Tianyu
• 0
0
votes
3
replies
2.0k
views
Trouble installing splatter
installation
splatter
7.0 years ago
luke.zappia
▴ 50
0
votes
1
reply
967
views
Splatter (unknown correlation between gene expression level in different cell types)
SingleCellData
splatter
updated 2.0 years ago by
luke.zappia
▴ 50 • written 2.0 years ago by
Fatima
• 0
0
votes
1
reply
916
views
Robustness of Splat cell grouping
splatter
6.9 years ago
luke.zappia
▴ 50
0
votes
1
reply
1.1k
views
Control group size
splatter
6.5 years ago
luke.zappia
▴ 50
0
votes
1
reply
1.1k
views
Splatter: How to simulate cells in different groups and different path at the same time?
splatter
6.5 years ago
luke.zappia
▴ 50
0
votes
1
reply
883
views
Simulating paths returns identical values
splatter
6.1 years ago
luke.zappia
▴ 50
0
votes
5
replies
1.2k
views
How to use Splatter to simulate a known number of DE genes in only two groups of cells ?
splatter
Splatter
updated 5.2 years ago by
luke.zappia
▴ 50 • written 5.2 years ago by
chenxofhit
• 0
16 results • Page
1 of 1
Recent ...
Replies
Comment: Why does GSEA on edgeR results for randomized samples give highly significant p-
by
Chris
• 0
Intent to delete when going home. Sorry for that!
Comment: Why does GSEA on edgeR results for randomized samples give highly significant p-
by
Gordon Smyth
50k
Please ask you own question. Inserting your own dataset into someone else's question like this is very impolite. I have already answered m…
Comment: package goseq seems to be not available on the latest version of R
by
Gordon Smyth
50k
limma most certainly is available. It installs in R 4.4.0 and Bioc 3.19 for all platforms without any issues. It has not had any period of …
Comment: package goseq seems to be not available on the latest version of R
by
Patrycja
▴ 20
limma package also isn't available.Is there any information when these packages will be available?
Comment: Why does GSEA on edgeR results for randomized samples give highly significant p-
by
Chris
• 0
Thanks Gordon for the advice!
Votes
Comment: Why does GSEA on edgeR results for randomized samples give highly significant p-
Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-
Handling multiple differential expression comparisons
Answer: fgsea significant result
Answer: fgsea significant result
Awards
• All
Scholar
to
ATpoint
★ 4.1k
Popular Question
to
Ben
▴ 50
Popular Question
to
Sam
▴ 10
Popular Question
to
Gordon Smyth
50k
Popular Question
to
Zainab
▴ 10
Locations
• All
European Union,
4 minutes ago
United States,
9 minutes ago
United Kingdom,
12 minutes ago
France,
18 minutes ago
The city by the bay,
31 minutes ago
Traffic: 519 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6