Showing : annbuilder • reset
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906
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reference question
AnnBuilder GOstats AnnBuilder GOstats
updated 19.1 years ago by ★ 13k • written 19.1 years ago by ▴ 310
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7
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2.2k
views
annotation package for chicken affyprobes
Annotation Organism Gallus gallus probe AnnBuilder Annotation Organism Gallus gallus probe
updated 19.2 years ago by ▴ 180 • written 19.3 years ago by ▴ 870
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3
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1.2k
views
athPkgBuilder
Annotation GO AnnBuilder Annotation GO AnnBuilder
updated 19.2 years ago by ▴ 870 • written 19.3 years ago by ▴ 80
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1
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819
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AnnBuilder problem with CHR slot
Annotation GO probe annotate AnnBuilder Annotation GO probe annotate AnnBuilder
updated 19.3 years ago by ▴ 870 • written 19.3 years ago by ▴ 310
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803
views
AnnBuilder package: problem with basefile type of
AnnBuilder AnnBuilder
19.3 years ago Nianhua Li ▴ 870
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898
views
AnnBuilder package: problem with basefile type of "refseq" or "gbNRef"
Annotation probe annotate AnnBuilder Annotation probe annotate AnnBuilder
19.3 years ago Luo Weijun ★ 1.6k
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5
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1.8k
views
Missing chromosomal locations in hgu133a package
hgu133a AnnBuilder safe hgu133a AnnBuilder safe
updated 19.3 years ago by ▴ 870 • written 19.4 years ago by ▴ 60
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1
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1.3k
views
Too many open files error with groupName = "all" in biocLite() call on Apple OS X
Cancer Breast Biobase AnnBuilder xcms Cancer Breast Biobase AnnBuilder xcms
updated 19.3 years ago by ★ 7.4k • written 19.3 years ago by ▴ 310
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10
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2.5k
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AnnBuilder doesn't work on gene information ("GENENAME", "SYMBOL", etc)
Microarray Annotation probe annotate affy AnnBuilder Microarray Annotation probe annotate
updated 19.3 years ago by ★ 2.9k • written 19.4 years ago by ★ 1.6k
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742
views
AnnBuilder doesn't work on gene information ("SYMBOL", "GENENAME", etc)
probe AnnBuilder probe AnnBuilder
19.4 years ago Luo Weijun ★ 1.6k
0
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6
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1.3k
views
AnnBuilder doesn't work on gene information ("GENENAME", "SYMBOL", etc)
AnnBuilder AnnBuilder
updated 19.4 years ago by ★ 1.6k • written 19.4 years ago by ▴ 870
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0
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733
views
goCluster results
Annotation AnnBuilder goCluster Annotation AnnBuilder goCluster
19.4 years ago Tabare Mourot ▴ 100
0
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1.2k
views
problem with chromosome location in annotations WAS: search archives and annnotate questions
Annotation GO annotate affy AnnBuilder codelink Annotation GO annotate affy AnnBuilder
19.5 years ago Diego Diez ▴ 760
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1
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776
views
Affychip coli asv2 annotation files
Annotation AnnBuilder Annotation AnnBuilder
updated 19.6 years ago by ★ 7.4k • written 19.6 years ago by ▴ 50
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0
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574
views
FW: AnnBuilder package and URLs
AnnBuilder AnnBuilder
19.6 years ago Sean Davis 21k
0
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0
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798
views
running AnnBuilder Vignette:Error in baseFile
AnnBuilder AnnBuilder
19.6 years ago Xue Lin ▴ 10
0
votes
1
reply
1.0k
views
AnnBuilder package and URLs
AnnBuilder AnnBuilder
updated 19.6 years ago by ▴ 780 • written 19.6 years ago by ▴ 100
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3
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1.7k
views
Help with annotation packages
Microarray Annotation GO Anopheles gambiae probe annotate limma AnnBuilder biomaRt GO
updated 19.6 years ago by ▴ 420 • written 19.6 years ago by ▴ 460
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1
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1.1k
views
Build an Annotation with GO2ALLPROBES
Genetics Annotation AnnBuilder GOstats Genetics Annotation AnnBuilder GOstats
updated 19.7 years ago by ▴ 780 • written 19.7 years ago by ▴ 20
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2
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1.5k
views
AnnBuilder problem for mu11ksuba
Organism mu11ksuba annotate limma gcrma matchprobes annaffy AnnBuilder Organism mu11ksuba
updated 19.7 years ago by ▴ 780 • written 19.7 years ago by ★ 1.4k
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2
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1.4k
views
AnnBuilder subscript out of bounds error
Microarray Genetics Annotation GO probe AnnBuilder PROcess Microarray Genetics Annotation
updated 19.7 years ago by ▴ 780 • written 19.7 years ago by ▴ 20
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1
reply
1.1k
views
AnnBuilder error
GO Organism annotate AnnBuilder GO Organism annotate AnnBuilder
updated 19.7 years ago by ▴ 780 • written 19.7 years ago by ▴ 510
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5
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1.4k
views
AnnBuilder built package not supported in R 2.2.0
Annotation AnnBuilder Annotation AnnBuilder
updated 19.7 years ago by ★ 2.9k • written 19.7 years ago by ▴ 30
0
votes
1
reply
1.2k
views
GEOquery & GDS2eSet error
Annotation Cancer Breast Biobase affy limma AnnBuilder GEOquery Annotation Cancer Breast
updated 19.8 years ago by 21k • written 19.8 years ago by ▴ 300
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0
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785
views
mapping probes between different platforms [again]
Annotation annotate AnnBuilder Annotation annotate AnnBuilder
19.8 years ago Mattias de Hollander ▴ 20
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4
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1.7k
views
Error while using AnnBuilder
Annotation GO Organism annotate AnnBuilder Annotation GO Organism annotate AnnBuilder
updated 19.8 years ago by ★ 7.4k • written 19.8 years ago by ▴ 160
0
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1
reply
943
views
Error with AnnBuilder ABPkgBuilder
GO Organism annotate AnnBuilder GO Organism annotate AnnBuilder
updated 19.8 years ago by ▴ 780 • written 19.8 years ago by ▴ 20
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1
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1.1k
views
help aobut AnnBuilder
GO Organism AnnBuilder GO Organism AnnBuilder
updated 19.9 years ago by ▴ 780 • written 19.9 years ago by ▴ 30
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3
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1.2k
views
hgu133aMAP2PROBE...?
AnnBuilder AnnBuilder
updated 19.9 years ago by ★ 2.9k • written 19.9 years ago by ▴ 310
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1
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1.2k
views
AnnBuilder/ABPkgBuilder URL problem
Annotation GO AnnBuilder oligo Annotation GO AnnBuilder oligo
updated 19.9 years ago by ▴ 780 • written 19.9 years ago by ▴ 100
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2
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1.5k
views
[AnnBuilder] How to use/load generated annotation packages
AnnBuilder AnnBuilder
updated 20.0 years ago by ▴ 780 • written 20.0 years ago by ▴ 20
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1
reply
1.1k
views
Resourcerer warnings
GO Organism reposTools AnnBuilder Resourcerer GO Organism reposTools AnnBuilder
20.0 years ago Francois Pepin ★ 1.3k
0
votes
2
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1.2k
views
AnnBuilder problem?
Organism Biobase annotate AnnBuilder Organism Biobase annotate AnnBuilder
updated 20.0 years ago by ▴ 780 • written 20.0 years ago by ▴ 50
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2
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803
views
AnnBuilder downloadSourceData()
AnnBuilder AnnBuilder
updated 20.1 years ago by ▴ 780 • written 20.1 years ago by ▴ 50
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0
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627
views
Fwd: Re: AnnBuilder-1.5.31 question
Microarray Annotation Cancer probe annotate AnnBuilder Microarray Annotation Cancer probe
20.1 years ago Ting-Yuan Liu FHCRC ▴ 780
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0
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759
views
AnnBuilder for other organisms
Annotation AnnBuilder Annotation AnnBuilder
20.2 years ago Bornman, Daniel M ▴ 110
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0
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828
views
Using AnnBuilder for other organisms
Annotation AnnBuilder Annotation AnnBuilder
20.2 years ago Bornman, Daniel M ▴ 110
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0
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1.0k
views
ABPkgBuilder Error; Again
Annotation GO Cancer Organism Biobase annotate AnnBuilder PROcess Annotation GO Cancer
20.3 years ago Barry Henderson ▴ 250
0
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4
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1.4k
views
ABPkgBuilder Error; Again: Solved
Annotation GO Cancer Organism Biobase annotate AnnBuilder PROcess Annotation GO Cancer
updated 20.3 years ago by ★ 7.4k • written 20.3 years ago by ▴ 250
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1
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1.5k
views
organism = mouse or Mus Musculus in AnnBuilder
Microarray Organism Mus musculus AnnBuilder Microarray Organism Mus musculus AnnBuilder
updated 20.4 years ago by ★ 2.9k • written 20.4 years ago by ▴ 140
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4
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1.5k
views
Error in AnnBuilder writeAnnData2Pkg
Annotation zebrafish AnnBuilder Annotation zebrafish AnnBuilder
updated 20.5 years ago by ★ 2.9k • written 20.5 years ago by ▴ 510
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0
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1.6k
views
Re: Defining your own chromosome annotations
Microarray geneplotter limma AnnBuilder genomes Microarray geneplotter limma AnnBuilder
20.5 years ago Palmer, Lance ▴ 30
0
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0
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776
views
retrieve raw data from soft file
AnnBuilder AnnBuilder
20.6 years ago Sean Davis 21k
0
votes
0
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786
views
Arabidopsis annotation package
AnnBuilder AnnBuilder
20.6 years ago Dion Whitehead ▴ 50
0
votes
4
replies
1.4k
views
missing AnnBuilder parser
Annotation Organism annotate AnnBuilder Annotation Organism annotate AnnBuilder
updated 20.6 years ago by ★ 2.9k • written 20.6 years ago by ★ 1.3k
0
votes
7
replies
2.4k
views
annaffy annotation problem (hgu133plus2)
Annotation hgu133plus2 probe annotate AnnBuilder Annotation hgu133plus2 probe annotate
updated 20.6 years ago by ▴ 170 • written 20.6 years ago by ▴ 430
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7
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2.6k
views
AnnBuilder questions...
Annotation annotate AnnBuilder Annotation annotate AnnBuilder
20.7 years ago Dipl.-Ing. Johannes Rainer ▴ 430
0
votes
5
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1.4k
views
load AnnBuilder and install XML
AnnBuilder AnnBuilder
updated 20.7 years ago by ★ 7.4k • written 20.7 years ago by ▴ 120
0
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0
replies
718
views
annotaion in bioconductor
AnnBuilder AnnBuilder
20.7 years ago Seth Falcon ★ 7.4k
0
votes
0
replies
667
views
annotaion in bioconductor
AnnBuilder AnnBuilder
20.7 years ago Colantuoni, Carlo NIH/NIMH ▴ 10
145 results • Page 2 of 3
Recent ...
Replies
Comment: What R/Bioconductor tools would you recommend for the analysis of sncRNA, specif by Matthew Thornton ▴ 380
WOW! Thank you so much for the information. I will do this.
Comment: "Watched Tags" are being erased rather than updated by RalphSavage99 • 0
Thanks for sharing https://github.com/Bioconductor/support.bioconductor.org/issues/112
Answer: Add additional maintainer for MOFA2 by shepherl 4.2k
These requests are best on the bioc-devel @ r-project.org or a request to maintainer @ bioconductor.org -- We would ideally need the curre…
Answer: After running samtools, the featureCounts command crashed. by Kevin Blighe ★ 4.0k
Hi Rui Tang, The "buffer overflow detected" error in featureCounts usually stems from a corrupted or malformed GTF file, often due to tr…
Answer: Problem with the TMB plot by Kevin Blighe ★ 4.0k
Hi, The linear TMB plot with no clustering suggests your variant calls may lack sample-specific discrimination, likely due to filtering ap…
Votes
Answer: What R/Bioconductor tools would you recommend for the analysis of sncRNA, specif
Using edgeR or DESeq2 to analyze allele-specific expression?
Answer: DESeq2 design for haplotype MPRA
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Awards • All
Popular Question to Hervé Pagès 16k
Popular Question to shepherl 4.2k
Scholar to James W. MacDonald 68k
Popular Question to Daniel Cameron ▴ 40
Popular Question to Peter Hickey ▴ 760
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