Bioconductor Annotatepeak

Showing : annotatepeak • reset

3

votes

2

replies

2.1k

views

GRanges ChIPseeker annotatePeak TxDb EnsDb

updated 5.9 years ago by Johannes Rainer ★ 2.1k • written 5.9 years ago by foehn ▴ 100

3

votes

1

reply

1.5k

views

chipseeker annotatepeak

updated 7.1 years ago by Guangchuang Yu ★ 1.2k • written 7.1 years ago by Wojeff • 0

5

votes

8

replies

2.6k

views

genomicranges granges iranges annotatepeak

updated 8.7 years ago by Michael Lawrence ★ 11k • written 8.7 years ago by Dimitris Polychronopoulos ▴ 80

7

votes

11

replies

5.5k

views

annotatePeak chipseeker chipseq org.Mm.eg.db TxDb.Mmusculus.UCSC.mm9.knownGene

updated 9.2 years ago by Martin Morgan 25k • written 9.4 years ago by Elsa • 0

4 results • Page 1 of 1

Recent ...

Replies

Comment: Any tools to convert .gff to .gtf format by ControlF5 • 0

Yes, the Appsierra team recently built a tool to convert .gff to .gtf format. [ControlF5][1] is providing the best software testing service…

Comment: EuroBioC2024 abstract submission is open! by Alan Downey • 0

EuroBioC2024 has opened its abstract submission process, presenting an exciting opportunity for researchers to contribute to groundbreaking…

Comment: ChAMP.DMR error - Error in makeGenomicRatioSetFromMatrix by O'Brien • 0

Consult the ChAMP.DMR documentation for more information on supported array types and expected data formats: https://bioconductor.org/packa…

Answer: combining raw counts and estimated counts by O'Brien • 0

It is possible to combine raw counts from TCGA and estimated counts from GEO datasets (Kalisto pseudoalignment) while mitigating batch effe…

Comment: Packages don't update, but no error or warning is thrown by neighsanlo • 0

@[sandtrix][1] This is useful information. [1]: https://sandtrix.io

Votes

A: GWAS analysis with Illumina HumanOmni5-4 BeadChip - recommended software and wor

A: RNA-seq Normalisation - normalise all samples in experiment or only the ones use

Answer: Can DESeq2's design compensate for sequencing experimental design shortcomings?

Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio

Awards • All

Popular Question to rohitsatyam102 ▴ 20