Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
annotatr
•
reset
0
votes
0
replies
168
views
Annotatr Duplicate Entries
annotatr
AnnotationHub
3 months ago
hayleyw
• 0
0
votes
0
replies
156
views
annotatr rn7?
annotatr
3 months ago
chuanjiao6
• 0
0
votes
1
reply
1.1k
views
sampling random regions of same nucleotide composition from hg38 genome
annotatr
regioneR
gkmSVM
updated 5 months ago by
Mahmoud
• 0 • written 3.4 years ago by
rohitsatyam102
▴ 20
0
votes
1
reply
537
views
custom annotations with annotatr
annotatr
12 months ago
luca.s
▴ 50
0
votes
1
reply
839
views
Problem with annotations using annotatr
annotatr
21 months ago
eric.rhoncalderon
• 0
0
votes
0
replies
708
views
Is it possible to output ensembl id for annotatr build_annotations basicgenes?
Annotation
annotatr
2.4 years ago
Ahdee
▴ 50
0
votes
0
replies
807
views
annotatr with custom TxDb
GenomicFeatures
annotatr
genomicFe
3.0 years ago
António Miguel de Jesus Domingues
▴ 510
0
votes
0
replies
835
views
annotatr package: GRanges object contains out-of-bound ranges
annotatr
GenomicRanges
3.5 years ago
Nala
• 0
3
votes
4
replies
1.5k
views
Can't install packages on R or via Bioconductor
R
installation
packages
annotatr
biocmanager
4.1 years ago
dakarai_esgdaille
▴ 10
1
vote
1
reply
1.4k
views
annotatr: CpG Island/Shore/Shelf IDs
annotatr
updated 5.4 years ago by
rcavalca
▴ 140 • written 5.4 years ago by
sorjuelal
• 0
0
votes
3
replies
1.3k
views
CpG site not annotated with annotatr
annotatr
cpg
updated 5.5 years ago by
rcavalca
▴ 140 • written 5.5 years ago by
soli5
• 0
0
votes
1
reply
933
views
ENSEMBL database for annotatr
annotatr
updated 6.2 years ago by
rcavalca
▴ 140 • written 6.2 years ago by
xie186
• 0
2
votes
2
replies
1.1k
views
Unexpected results from annotatr
annotatr
updated 6.2 years ago by
rcavalca
▴ 140 • written 6.2 years ago by
xie186
• 0
2
votes
2
replies
974
views
'fill_order' in annotatr
annotatr
updated 6.2 years ago by
rcavalca
▴ 140 • written 6.2 years ago by
xie186
• 0
1
vote
3
replies
1.4k
views
How can I use Annotatr on CDS?
Annotatr
CDS
Exon
UTR
updated 6.2 years ago by
rcavalca
▴ 140 • written 6.2 years ago by
xie186
• 0
0
votes
3
replies
1.1k
views
find intersections of genomic regions with built-in genomic annotations for S.Cerevisiae
annotatr
7.2 years ago
vivianengoune
• 0
0
votes
2
replies
1.6k
views
annotatr GRanges Error
annotatr
updated 7.2 years ago by
rcavalca
▴ 140 • written 7.2 years ago by
cguzman.roma
• 0
4
votes
2
replies
1.1k
views
Annotatr package not loading certain features
annotatr
updated 7.4 years ago by
Valerie Obenchain
★ 6.8k • written 7.4 years ago by
divyswar01
• 0
18 results • Page
1 of 1
Recent ...
Replies
Answer: Once again a "Model matrix not full rank"
by
swbarnes2
★ 1.3k
Replicate numbers, like the 1 in control_1 are fine in sample names, but never add them to anything else in colData. From the computer's p…
Answer: limma Intercept vs No-intercept models completely changing DMR results?
by
Gordon Smyth
50k
I'll add a little bit of general advice to James' answer. You seem to have the misunderstanding that you can change the design matrix but …
Answer: package goseq seems to be not available on the latest version of R
by
Gordon Smyth
50k
It is true that goseq isn't available for Bioc 3.19. That is because goseq depends on txbmaker, which is itself not yet available for Bioc…
Answer: limma Intercept vs No-intercept models completely changing DMR results?
by
James W. MacDonald
65k
This part: ``` design_intercept <- model.matrix(~Alt+Sex+Age+PC1, data=targets_Sherpa) colnames(design_intercept) <- c("AltSHP_LA","Al…
Comment: CombineArrays for EPIC and EPIC V2
by
Kim
• 0
Thank you Tim, this is a great help in getting me started!
Votes
Answer: limma Intercept vs No-intercept models completely changing DMR results?
Answer: CombineArrays for EPIC and EPIC V2
Answer: Too many significant genes when integrating gtex and tcga
Comment: Too many significant genes when integrating gtex and tcga
A: Print Differentially Expressed Exons From Dexseq Results
Awards
• All
Popular Question
to
Gordon Smyth
50k
Popular Question
to
Zainab
• 0
Popular Question
to
Theo
▴ 10
Popular Question
to
gene_bioconductor
▴ 10
Popular Question
to
rohitsatyam102
▴ 20
Locations
• All
United States,
3 minutes ago
France,
10 minutes ago
Switzerland,
37 minutes ago
Ireland,
1 hour ago
France,
1 hour ago
Traffic: 515 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6