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annotatr
•
reset
3
votes
4
replies
1.5k
views
Can't install packages on R or via Bioconductor
R
installation
packages
annotatr
biocmanager
4.1 years ago
dakarai_esgdaille
▴ 10
0
votes
3
replies
1.1k
views
find intersections of genomic regions with built-in genomic annotations for S.Cerevisiae
annotatr
7.3 years ago
vivianengoune
• 0
1
vote
3
replies
1.4k
views
How can I use Annotatr on CDS?
Annotatr
CDS
Exon
UTR
updated 6.3 years ago by
rcavalca
▴ 140 • written 6.3 years ago by
xie186
• 0
0
votes
3
replies
1.3k
views
CpG site not annotated with annotatr
annotatr
cpg
updated 5.6 years ago by
rcavalca
▴ 140 • written 5.6 years ago by
soli5
• 0
4
votes
2
replies
1.2k
views
Annotatr package not loading certain features
annotatr
updated 7.5 years ago by
Valerie Obenchain
★ 6.8k • written 7.5 years ago by
divyswar01
• 0
0
votes
2
replies
1.6k
views
annotatr GRanges Error
annotatr
updated 7.3 years ago by
rcavalca
▴ 140 • written 7.3 years ago by
cguzman.roma
• 0
2
votes
2
replies
982
views
'fill_order' in annotatr
annotatr
updated 6.3 years ago by
rcavalca
▴ 140 • written 6.3 years ago by
xie186
• 0
2
votes
2
replies
1.1k
views
Unexpected results from annotatr
annotatr
updated 6.2 years ago by
rcavalca
▴ 140 • written 6.2 years ago by
xie186
• 0
0
votes
1
reply
1.1k
views
sampling random regions of same nucleotide composition from hg38 genome
annotatr
regioneR
gkmSVM
updated 6 months ago by
Mahmoud
• 0 • written 3.4 years ago by
rohitsatyam102
▴ 20
0
votes
1
reply
851
views
Problem with annotations using annotatr
annotatr
21 months ago
eric.rhoncalderon
• 0
0
votes
1
reply
548
views
custom annotations with annotatr
annotatr
12 months ago
luca.s
▴ 50
0
votes
1
reply
941
views
ENSEMBL database for annotatr
annotatr
updated 6.2 years ago by
rcavalca
▴ 140 • written 6.2 years ago by
xie186
• 0
1
vote
1
reply
1.4k
views
annotatr: CpG Island/Shore/Shelf IDs
annotatr
updated 5.5 years ago by
rcavalca
▴ 140 • written 5.5 years ago by
sorjuelal
• 0
0
votes
0
replies
188
views
Annotatr Duplicate Entries
annotatr
AnnotationHub
3 months ago
hayleyw
• 0
0
votes
0
replies
852
views
annotatr package: GRanges object contains out-of-bound ranges
annotatr
GenomicRanges
3.6 years ago
Nala
• 0
0
votes
0
replies
815
views
annotatr with custom TxDb
GenomicFeatures
annotatr
genomicFe
3.1 years ago
António Miguel de Jesus Domingues
▴ 510
0
votes
0
replies
165
views
annotatr rn7?
annotatr
4 months ago
chuanjiao6
• 0
0
votes
0
replies
720
views
Is it possible to output ensembl id for annotatr build_annotations basicgenes?
Annotation
annotatr
2.4 years ago
Ahdee
▴ 50
18 results • Page
1 of 1
Recent ...
Replies
Answer: Errors in chromosome annotation-biomaRt
by
James W. MacDonald
65k
If you are just using HGNC symbols for the lookup, and you are trying to get NCBI IDs, then I wouldn't use `biomaRt` because it's based on …
Comment: Help with ENmix readidat
by
James W. MacDonald
65k
Please don't add to posts from two years ago. Instead make a new post. Also, please read the help page for `readidat`. The only reason to …
Comment: LRT, more than two conditions and pairwise comparisons
by
James W. MacDonald
65k
In that case, probably easiest to subset to the groups being compared.
Comment: Help with ENmix readidat
by
minardsmitha
▴ 10
Did you figure this out? I have the same issue.
Comment: LRT, more than two conditions and pairwise comparisons
by
boczniak767
▴ 720
Thank you for response, apparently I still don't know much about statistics. In fact I want to campare time-profiles [and the LRT has been …
Votes
Comment: DESeq2- Mysterious interaction suppresses DEGs
Answer: DESeq2- Mysterious interaction suppresses DEGs
Answer: Subsetting RNAseq data | voomaByGroup()
biomaRt not working - lazy table error
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
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