Bioconductor Bam file

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R rnaseq bam file

updated 7.4 years ago by Gordon Smyth 53k • written 7.4 years ago by Merlin ▴ 10

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bam file STAR Illumina

updated 7.5 years ago by ta_awwad ▴ 10 • written 7.5 years ago by soheilazareie • 0

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bioconductor shortread bam file nucler

updated 7.6 years ago by Dario Strbenac ★ 1.6k • written 7.6 years ago by jfgout ▴ 10

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paired-end reads bam file

7.9 years ago ioannis.vardaxis ▴ 30

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bam file HIV cytosine

8.0 years ago achaillon • 0

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rsamtools bam file

updated 8.2 years ago by Martin Morgan 25k • written 8.2 years ago by seungjoon.kim • 0

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medips bam file

9.3 years ago fkuo ▴ 10

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csaw up regions bam file gain and loss of enrichment

updated 9.5 years ago by Aaron Lun ★ 29k • written 9.5 years ago by JoannaF ▴ 10

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Comment: Sharing a collection of datasets in ExperimentHub by Aaron Lun ★ 29k

FYI the **scRNAseq** packages uses a non-ExperimentHub storage platform, see [here](https://github.com/ArtifactDB/gypsum-worker) for more d…

Comment: Error Loading Experiment from SimBenchData Package by ATpoint ★ 4.9k

Is the Seurat package installed? The error somewhat suggests that it could be related, and at https://www.bioconductor.org/packages/release…

Answer: Help with defining groups by Gordon Smyth 53k

Defining sample groups is separate to reading in the DIA-NN data, because the sample conditions and covariates are not necessarily coded in…

Comment: Sharing a collection of datasets in ExperimentHub by Peter Hickey ▴ 760

The [**scRNAseq**](https://bioconductor.org/packages/scRNAseq/) package ([source on GitHub](https://github.com/LTLA/scRNAseq)) might serve …

Comment: Using DESeq2 on single cell RNA Seq data of same cell type but different conditi by ReinholdGaylord99 • 0

Thank you so much! https://www.nature.com/articles/s41467-021-25960-2/ [geometry dash lite](https://geometrydashlite.online)

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Answer: Expected memory usage for analyzing large single-cell seq datasets (> 450,000 ce