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bioMart
•
reset
2
votes
4
replies
360
views
Converting Probe IDs to HGNC symbols
Annotation
biomaRt
GEOquery
written 8 weeks ago by
Manav
▴ 10
0
votes
5
replies
3.2k
views
Ensembl site unresponsive via biomaRt
biomaRt
written 11 months ago by
hebda
• 0
1
vote
2
replies
533
views
News:
Upcoming Ensembl API and data access changes - new blog post available
ensembl
mart
biomaRt
ensembldb
written 3 months ago by
Ensembl_Jorge
▴ 10
0
votes
1
reply
466
views
Extract snp information from genomic regions with biomaRt -> "oaries_snp"
biomaRt
updated 3 months ago by
Kevin Blighe
★ 4.0k • written 6 months ago by
Jesus
• 0
5
votes
3
replies
808
views
Issues with downloading biomaRt - SeqInfo and S4 Vectors
S4Vectors
biomaRt
Seqinfo
updated 3 months ago by
James W. MacDonald
68k • written 3 months ago by
mgray20
▴ 10
0
votes
1
reply
559
views
News:
Ensembl 115 has been released!
ensembl
ensembldb
biomaRt
written 5 months ago by
Ensembl_Jorge
▴ 10
1
vote
3
replies
1.7k
views
News:
Ensembl 114 / Ensembl Genomes 61 has been released!
biomaRt
ensembldb
written 9 months ago by
Aleena_Ensembl
▴ 30
1
vote
1
reply
748
views
Biomart server error
biomaRt
BioMartGOGeneSets
updated 9 months ago by
James W. MacDonald
68k • written 9 months ago by
tarek.mohamed
• 0
0
votes
3
replies
980
views
getBM from biomaRt inconsistencies found with .gtf files across multiple species
.gtf
biomaRt
Ensembl
updated 11 months ago by
Mike Smith
★ 6.6k • written 11 months ago by
Benjamin
▴ 20
1
vote
1
reply
3.1k
views
How to download reference genomes using the RBioMart from ensembl?
biomaRt
updated 5 months ago by
Michael Love
43k • written 6.9 years ago by
jcollidelcs
• 0
0
votes
3
replies
2.7k
views
Connection error using biomaRt
biomart
annotation
updated 8 months ago by
lanaderay0011
• 0 • written 10.1 years ago by
elhananby
▴ 10
11 results • Page
1 of 1
Recent ...
Replies
Answer: Unable to find ENTREZ IDs
by
James W. MacDonald
68k
Those are the 'symbols', and are a concatenation of LOC and the NCBI Gene ID (what used to be called an Entrez Gene ID). As an example:http…
Answer: Inconsistencies between accessor functions for TxDb databases with selected seql
by
a2a2hd42aa
• 0
Technical inconsistencies in database accessors can disrupt your workflow, but finding a reliable source to download online mobile games sh…
Comment: Can sample-level weights be used when analysing GSVA scores in limma?
by
A.Barden
▴ 20
Thanks both for this useful information.
Comment: Reproducibility of code in various Bioconductor versions
by
Gordon Smyth
53k
SNPlocs.Hsapiens.dbSNP155.GRCh38 is available for download from the same location as always. It has not changed since Bioc 3.20: Presumabl…
Comment: Changing multiple display parameters of a specific exon in GeneRegionTrack
by
a2a2hd42aa
• 0
Similarly, for structural complexity in the [He777 Game][1] APK, having precise control over every detail is what makes a high-performance …
Votes
Do I map probes to gene symbols BEFORE or AFTER differentially expressed gene analysis?
Answer: Can sample-level weights be used when analysing GSVA scores in limma?
Answer: Can sample-level weights be used when analysing GSVA scores in limma?
Comment: Can sample-level weights be used when analysing GSVA scores in limma?
Answer: Issue loading and downloading Bioconductor 3.22 packages after update
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