Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
bplapply
•
reset
3
votes
2
replies
1.2k
views
bplapply doesn't work in the multicore mode on mac os x
bplapply
multicoreParam
mac os x
7.5 years ago
gmerino
▴ 20
0
votes
8
replies
1.8k
views
`bplapply` breaks down (BiocParallel_1.6.6, R 3.3.1, openSUSE Leap)
biocparallel
bplapply
Suse
error
process
updated 7.4 years ago by
jan.winter
• 0 • written 7.4 years ago by
schweringmarc01
• 0
4
votes
1
reply
5.4k
views
BPPARAM = bpparam() takes longer than using BPPARAM = SerialParam()
bplapply
updated 8.1 years ago by
Martin Morgan
25k • written 8.1 years ago by
benjamin.phillips22
▴ 10
4
votes
3
replies
2.9k
views
Problem with summarizeOverlaps() when reading >1 BAM file: "stop worker failed"
summarizeoverlaps
rnaseq
bplapply
rangedsummarizedexperiment
read counting
7.8 years ago
ErickF
▴ 40
3
votes
4
replies
1.1k
views
bplapply stalling upon error with large data objects
biocparallel
bplapply
multicore
updated 7.7 years ago by
Martin Morgan
25k • written 7.7 years ago by
Aaron Lun
★ 28k
1
vote
6
replies
1.6k
views
Disable messages for bplapply when in parallel
biocparallel
bplapply
updated 6.1 years ago by
Martin Morgan
25k • written 6.1 years ago by
ioannis.vardaxis
▴ 30
6
votes
7
replies
2.4k
views
bplapply with progressbar
bplapply
progressbar
updated 5.5 years ago by
Martin Morgan
25k • written 5.5 years ago by
wt215
• 0
1
vote
4
replies
2.0k
views
BiocParallel: What its the best way to pass large a dataset for parallel processing?
bioconductor
bplapply
bpiterate
iterator
BiocParallel
updated 4.8 years ago by
Martin Morgan
25k • written 4.8 years ago by
gabriel.hoffman
▴ 110
12
votes
11
replies
4.2k
views
Memory usage for bplapply -- is the entire environment copied over to each worker thread?
bplapply
biocparallel
deseq2
updated 8.8 years ago by
Valerie Obenchain
★ 6.8k • written 8.8 years ago by
Lauren
▴ 40
0
votes
0
replies
1.2k
views
Unexpected recursive unlist of bplapply (BiocParallel) results when using only one worker
biocparallel
bplapply
9.0 years ago
akaever
▴ 30
10 results • Page
1 of 1
Recent ...
Replies
Comment: Deseq2 and Normalization of RNA sequencing data
by
kcarey
• 0
Noise in terms of expression...to make sure that the information reported is not due to artifacts and actually expression. When I had FPKM …
Answer: NEED FOR NESSASORY HELP
by
Gordon Smyth
50k
Is this quesion related to your earlier question? https://support.bioconductor.org/p/9157127/ If you've already done an edgeR analysis, yo…
Answer: Gene-by-sample covariates in limma
by
Gordon Smyth
50k
Your first method would be valid if, instead of taking ratios, you instead used the differences between the log-transformed 13C and 12C int…
Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-
by
Gordon Smyth
50k
You have discovered something that I have pointed out many times on this forum. fgsea does not implement the classic GSEA method published …
Comment: Once again a "Model matrix not full rank"
by
James W. MacDonald
65k
In that case both time and treatment are identical things, so choose one and go with it.
Votes
Bioconductor 3.19 is Released!
A: Error in DESeqDataSet : some values in assay are not integers
Bioconductor 3.19 is Released!
Bioconductor 3.19 is Released!
Answer: DEseq2 coefficient
Awards
• All
Popular Question
to
gene_bioconductor
▴ 10
Popular Question
to
rohitsatyam102
▴ 20
Popular Question
to
shepherl
3.9k
Popular Question
to
siajunren
• 0
Scholar
to
Rory Stark
★ 5.2k
Locations
• All
The city by the bay,
3 minutes ago
WEHI, Melbourne, Australia,
7 minutes ago
France,
14 minutes ago
St Louis, MO,
3 hours ago
United States,
3 hours ago
Traffic: 545 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6