Showing : cdf • reset
0
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4
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1.4k
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altcdfenvs
ath1121501 cdf probe ath1121501 cdf probe
updated 21.0 years ago by ▴ 900 • written 21.0 years ago by ▴ 60
0
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0
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770
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gcrma - all low value output - error somewhere?
cdf affy gcrma matchprobes cdf affy gcrma matchprobes
21.0 years ago Matthew Hannah ▴ 940
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0
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1.5k
views
Installing Rv2.0.0 on MacOS 10.3.x
moe430a cdf probe annotate genefilter reposTools affy annaffy moe430a cdf probe affy
21.0 years ago rkakkar@uchicago.edu ▴ 100
0
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1
reply
2.0k
views
Rv1.91 or v2.0.0 on MacOS 10.3.5
SAGE GO Kidney hgu95av2 hu6800 rae230a cdf Biobase Ruuid DynDoc annotate edd multtest
updated 21.0 years ago by ★ 5.5k • written 21.0 years ago by ▴ 100
0
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0
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928
views
Error message in RMA
cdf cdf
21.0 years ago Lizhe Xu ▴ 210
0
votes
1
reply
896
views
ttest genefilter 1.4.5 error on Rv2.0.0
cdf genefilter cdf genefilter
updated 21.1 years ago by ★ 5.5k • written 21.1 years ago by ▴ 100
0
votes
1
reply
901
views
problems with genome files?
cdf cdf
updated 21.1 years ago by ★ 5.5k • written 21.1 years ago by ▴ 10
0
votes
0
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863
views
error using genefilter for ttest in Rv2.0.0
cdf genefilter cdf genefilter
21.1 years ago rkakkar@uchicago.edu ▴ 100
0
votes
0
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1.0k
views
QC questions
zebrafish cdf makecdfenv simpleaffy zebrafish cdf makecdfenv simpleaffy
21.1 years ago Crispin Miller ★ 1.1k
0
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1
reply
994
views
problems using cdfenv
zebrafish cdf makecdfenv simpleaffy zebrafish cdf makecdfenv simpleaffy
updated 21.1 years ago by 68k • written 21.1 years ago by ▴ 510
0
votes
1
reply
988
views
missing xy2i and i2xy functions
cdf cdf
updated 21.1 years ago by 68k • written 21.1 years ago by ▴ 20
0
votes
1
reply
897
views
questions about U133A cdf packages
cdf cdf
updated 21.1 years ago by 68k • written 21.1 years ago by ▴ 20
0
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0
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580
views
Metadata for Atgenome1 array
cdf probe gcrma cdf probe gcrma
21.1 years ago andy phillips RRes-Roth ▴ 10
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0
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1.1k
views
HGU95A and HGU95ACDF
Annotation Cancer hgu95a hgu95av2 cdf Annotation Cancer hgu95a hgu95av2 cdf
21.2 years ago John Zhang ★ 2.9k
0
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2
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1.0k
views
Install HGU133a_tag in Linux.
cdf cdf
updated 21.2 years ago by ★ 3.9k • written 21.2 years ago by ▴ 10
0
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0
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796
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Basic Question
Normalization cdf probe Normalization cdf probe
21.2 years ago Marcus Albrecht ▴ 20
0
votes
2
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1.2k
views
GCRMA fails with MOE430A Only
moe430a cdf probe gcrma PROcess moe430a cdf probe gcrma PROcess
updated 21.2 years ago by 68k • written 21.2 years ago by ▴ 340
0
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0
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817
views
What is the maximaze number(size) of cel files can PC handle?
cdf affy cdf affy
21.2 years ago Joyce Gu ▴ 200
0
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0
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813
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problem to read .CEL file
cdf affy cdf affy
21.2 years ago pingzhao Hu ▴ 210
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3
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1.5k
views
INstalling devel version
Microarray Pharmacogenomics Annotation GO Cancer cdf probe affy makecdfenv limma annaffy
21.2 years ago Mayte Suarez-Farinas ▴ 300
0
votes
1
reply
1.0k
views
Selecting probe pairs for analysis
cdf probe makecdfenv cdf probe makecdfenv
updated 21.2 years ago by ▴ 950 • written 21.2 years ago by ▴ 60
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2
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1.0k
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Affymetrix cdf-package question
cdf cdf
updated 21.3 years ago by ★ 3.9k • written 21.3 years ago by ▴ 180
0
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0
replies
685
views
Re: Bioconductor Digest, Vol 17, Issue 17
cdf affy cdf affy
21.3 years ago Raoul-Sam Daruwala ▴ 30
0
votes
1
reply
799
views
Question
cdf affy cdf affy
updated 21.3 years ago by 68k • written 21.3 years ago by ▴ 20
0
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0
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709
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[Fwd: Question]
cdf affy cdf affy
21.3 years ago jcurry@vbi.vt.edu ▴ 20
0
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0
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822
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problems in makecdfenv with affy custom resequencing arrays
cdf affy cdf affy
21.3 years ago Vishal Berry ▴ 10
0
votes
1
reply
785
views
Making alternative CDF enviroments
cdf cdf
updated 21.3 years ago by ▴ 950 • written 21.3 years ago by ▴ 10
0
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0
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1.2k
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FW: makecdfenv()
GO cdf PROcess altcdfenvs GO cdf PROcess altcdfenvs
21.3 years ago Lana Schaffer ▴ 80
0
votes
1
reply
811
views
makecdfenv()
cdf cdf
updated 21.3 years ago by ★ 5.5k • written 21.3 years ago by ▴ 80
0
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5
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1.5k
views
a custom CDF file
cdf cdf
updated 21.4 years ago by 68k • written 21.4 years ago by ▴ 80
0
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1
reply
1.3k
views
How to create a custom CDF ?
mgu74av2 cdf probe affy makecdfenv gcrma mgu74av2 cdf probe affy makecdfenv gcrma
updated 21.4 years ago by ★ 1.1k • written 21.4 years ago by ▴ 10
0
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0
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929
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RMA
Microarray Cancer cdf Microarray Cancer cdf
21.4 years ago James W. MacDonald 68k
0
votes
1
reply
1.3k
views
Simple Affy
cdf affy simpleaffy cdf affy simpleaffy
updated 21.4 years ago by ★ 1.1k • written 21.4 years ago by ▴ 510
0
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0
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896
views
affylmGUI fix (topTable/CDF name)
Annotation cdf affylmGUI Annotation cdf affylmGUI
21.4 years ago James Wettenhall ▴ 1000
0
votes
2
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1.2k
views
Regarding Tcltk and CDF error
Cancer cdf rhdf5 Rgraphviz Cancer cdf rhdf5 Rgraphviz
updated 21.4 years ago by ▴ 1000 • written 21.4 years ago by ★ 1.1k
0
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0
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717
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correction in my tcltk and CDF error question........
cdf cdf
21.4 years ago SAURIN ★ 1.1k
0
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1
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1.9k
views
Bioconductor setup
cdf cdf
updated 21.4 years ago by ★ 3.9k • written 21.4 years ago by ▴ 10
0
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0
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681
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Mapping 10k chip
cdf probe cdf probe
21.4 years ago Glenn Stone ▴ 10
0
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0
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1.2k
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limmaGUI & affylmGUI wizards for Windows & bug fixes
Microarray Genetics cdf affylmGUI limmaGUI Microarray Genetics cdf affylmGUI limmaGUI
21.5 years ago James Wettenhall ▴ 1000
0
votes
0
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844
views
simpleaffy error for mouse4302cdf
Annotation cdf probe Annotation cdf probe
21.5 years ago Dick Beyer ★ 1.4k
0
votes
0
replies
961
views
How to create customized probe package for GCRMA?
cdf probe affy makecdfenv gcrma cdf probe affy makecdfenv gcrma
21.5 years ago Kun Zhang ▴ 10
0
votes
1
reply
906
views
makecdfenv not installed?
cdf makecdfenv cdf makecdfenv
updated 21.5 years ago by ★ 3.9k • written 21.5 years ago by ▴ 10
0
votes
1
reply
1.0k
views
cdf vs probe package & Linux vs PC
ath1121501 cdf probe affy ath1121501 cdf probe affy
updated 21.5 years ago by ★ 13k • written 21.5 years ago by ▴ 90
1
vote
0
replies
984
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Binary CEL and CDF files
cdf affy cdf affy
21.5 years ago PARK,CHRISTOPHER CHANGSUN ▴ 50
0
votes
1
reply
881
views
package hgu95av2cdf for R 1.9.0
cdf cdf
updated 21.5 years ago by 68k • written 21.5 years ago by ▴ 230
0
votes
2
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1.6k
views
Difficulty in getting a boxplot display of nomralized data using affy
Cancer cdf affy Cancer cdf affy
updated 21.5 years ago by ▴ 130 • written 21.5 years ago by ★ 2.0k
0
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0
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1.1k
views
Difficulty in getting a boxplot display of nomralized datausing affy
Microarray Cancer cdf affy Microarray Cancer cdf affy
21.5 years ago James W. MacDonald 68k
0
votes
0
replies
1.0k
views
gcrma 1.0.0 vs 1.0.6
mgu74av2 cdf gcrma mgu74av2 cdf gcrma
21.5 years ago Dick Beyer ★ 1.4k
0
votes
1
reply
963
views
Affy Bioconductor with Rat230_2 chips
cdf simpleaffy PROcess cdf simpleaffy PROcess
updated 21.5 years ago by ★ 1.1k • written 21.5 years ago by ▴ 10
0
votes
2
replies
896
views
CDF environment for U133_X3P
cdf PROcess cdf PROcess
updated 21.6 years ago by ★ 13k • written 21.6 years ago by ▴ 900
927 results • Page 16 of 19
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Comment: After running samtools, the featureCounts command crashed. by eja.gssssse.r.m • 0
The buffer overflow detected error in your featureCount step usually indicates that the program is trying to write more data into memory …
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It sounds like your AUCell results may be showing high AUC scores without cell assignment due to thresholding or scoring cutoffs. Think of …
Answer: "Watched Tags" are being erased rather than updated by shepherl 4.2k
This should now be resolved
Answer: Question about collapsing ASVs by genus level during DESeq2 analysis by Michael Love 43k
I'll just note that microbiome stats folks tend to use other tools than DESeq2. > several ASVs belong to the same genus but are not iden…
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Yes, Option 1 (technical homogenization) reprocessing paired-end samples as single-end using only R1 is the most defensible approach when l…
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Bioconductor 3.22 Released!
Bioconductor 3.22 Released!
Comment: "Watched Tags" are being erased rather than updated
Comment: deseq2 filter the low counts
Answer: DESeq2 interactions
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