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champ
•
reset
0
votes
0
replies
14
views
ChAMP installation issue
Cha
ChAMP
3 hours ago
e1271094
• 0
1
vote
4
replies
256
views
Error EPICv2 ChAMP
ChAMPdata
IlluminaHumanMethylationEPICv2anno.20a1.hg38
ChAMP
updated 20 days ago by
James W. MacDonald
65k • written 24 days ago by
Mirella Aurora
• 0
1
vote
2
replies
168
views
Error in champ.load(): The following specified files do not exist
ChAMP
25 days ago • updated 24 days ago
Sherin
• 0
2
votes
6
replies
1.5k
views
How to get DMR for Infinium methylation EPIC v2
ChAMP
DMRcate
minfi
updated 5 weeks ago by
Tim Peters
▴ 180 • written 5 months ago by
rae.alshammari
▴ 10
1
vote
1
reply
314
views
Need Advice: Issue with ChAMP Analysis - Meth and UnMeth Matrix Pairing Error
MethylationArray
methylationArrayAnalysis
ChAMP
updated 11 weeks ago by
James W. MacDonald
65k • written 11 weeks ago by
david.cheishvili
• 0
0
votes
0
replies
224
views
how to solve this error?
ChAMPdata
ChAMP
12 weeks ago
Meghana
• 0
0
votes
2
replies
710
views
ChAMP - obtaining beta values using EPICv2 annotation
ChAMP
EPICv2
updated 3 months ago by
shuo
• 0 • written 4 months ago by
ChunkyJones
• 0
0
votes
0
replies
163
views
champ.load() from .idat files of GDC/TCGA dataset
TCGAbiolinks
ChAMP
3 months ago
Thalita
• 0
0
votes
7
replies
668
views
Deleted:No significant MVPs with a BH adjusted P-value below 0.05
ChAMP
updated 5 months ago by
Basti
▴ 780 • written 5 months ago by
486342583
• 0
2
votes
1
reply
611
views
ChAMP can't be found in Bioc3.18?
ChAMP
5 months ago
ramonfallon
▴ 20
0
votes
7
replies
1.8k
views
error with champ.load
ChAMP
champ
methylation
updated 8 months ago by
mike
• 0 • written 4.1 years ago by
jkong
• 0
0
votes
3
replies
678
views
ChAMP trouble reading csv file
ChAMP
written 9 months ago by
Keasiykan
• 0
1
vote
7
replies
1.8k
views
Error using champ.import
ChAMP
EPICv2
updated 25 days ago by
shilpa
• 0 • written 10 months ago by
medha.suman
• 0
1
vote
16
replies
3.3k
views
error in ChAMP loading file
ChAMP
updated 8 weeks ago by
hortense96
• 0 • written 18 months ago by
Giulia
• 0
3
votes
7
replies
5.4k
views
error with champ.load
champ
written 6.5 years ago by
o.giannakopoulou
▴ 10
0
votes
2
replies
1.2k
views
Trouble Loading Data into Champ
loaddata
ChAMPdata
champload
R
ChAMP
updated 11 months ago by
hfbarrerat
• 0 • written 3.2 years ago by
Bethan
• 0
0
votes
3
replies
731
views
Error in champ.load() function
ChAMP
updated 12 months ago by
James W. MacDonald
65k • written 12 months ago by
Monalisa
• 0
2
votes
5
replies
1.9k
views
Problem at champ.load
ChAMPdata
ChAMP
updated 8 weeks ago by
James W. MacDonald
65k • written 12 months ago by
angel
• 0
2
votes
7
replies
2.5k
views
Blood cell composition adjustment in methylation EPIC array: ChAMP
MethylationArray
methylationArrayAnalysis
ChAMP
updated 7 months ago by
dorota.komar
• 0 • written 3.4 years ago by
Ankit
▴ 20
3
votes
5
replies
2.2k
views
Why the LogFC and delta-beta value are different in ChAMP
DNAMethylation
ChAMP
updated 11 weeks ago by
sup0903
• 0 • written 3.4 years ago by
Hongbii
• 0
0
votes
2
replies
2.1k
views
ChAMP::champ.norm Error in champ.BMIQ(beta[, x], design.v, sampleID = colnames(beta)[x], : task 1 failed - "only defined on a data frame with all…
ChAMP
methylation
BMIQ
updated 6 months ago by
peter.brederlo
• 0 • written 5.0 years ago by
moldach
▴ 20
0
votes
2
replies
1.0k
views
error when using M-values in ChAMP
ChAMP
updated 6 weeks ago by
hortense96
• 0 • written 6.3 years ago by
a.mcneill
• 0
22 results • Page
1 of 1
Recent ...
Replies
Comment: More regions in union when increasing DBA$config$mergeOverlap
by
Ziliang
• 0
I am so confused and frustrated learning to use this software. Isn't how you merge the peaksets one of the most important steps for the com…
Answer: SingleR Label.Ont
by
Denis
• 0
[Jackpot City Casino][1] is the perfect option when looking for an online casino in Canada for an exciting vacation and huge winnings that …
Comment: deseq2 results
by
sajadahmad41454
• 0
thank you so much and sorry for bothering you again and again, it is urgent because it is my project deadline. i have removed that sample a…
Comment: deseq2 results
by
swbarnes2
★ 1.4k
Ask the people who made the libraires if there was anything unusual in the QC of the outlier sample. Try to figure out what biologically …
Comment: Can't post a question containing code?
by
NATASHA
• 0
did you find a solution? I´m having the same problem
Votes
Answer: minfi latest update for EPIC V2 chip
A: AIC-like measure for DESeq2
Comment: Extremely small p-values using Limma for proteomic data
Comment: Log-cpm values from limma
Comment: Log-cpm values from limma
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