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consensus
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4
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1.7k
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consensus analysis and dba.count function
diffbind
consensus
7.3 years ago
pabla86
• 0
0
votes
1
reply
1.3k
views
SC3 how to customize plots ?
SC3
plot
consensus
marker
heatmap
updated 5.4 years ago by
Vladimir Kiselev
▴ 150 • written 5.4 years ago by
shaktirielland
• 0
1
vote
2
replies
1.1k
views
DiffBind returns empty consensus peakset
DiffBind
consensus
updated 4.9 years ago by
Rory Stark
★ 5.2k • written 4.9 years ago by
aviv.de-morgan
• 0
0
votes
1
reply
1.4k
views
Consensus sequence from BAM file
consensus
BAM
updated 4.5 years ago by
Hervé Pagès
16k • written 4.5 years ago by
O. William McClung
• 0
0
votes
0
replies
426
views
blockwiseConsensusModules won't save individualTOM data?
blockwiseconsensusModules
WGCNA
consensus
11 months ago
Levi
• 0
0
votes
1
reply
1.2k
views
WGCNA: Obtaining a consensus network from sampledBlockwiseModules function output
Network
consensus
sampledBlockwiseModules
resampling
WGCNA
updated 2.3 years ago by
Peter Langfelder
★ 3.0k • written 2.3 years ago by
Caleb Bostwick
▴ 30
0
votes
0
replies
1.1k
views
consensus module relationship
wgcna
wgcna package
consensus
5.6 years ago
2323982403
▴ 60
7 results • Page
1 of 1
Recent ...
Replies
Comment: More regions in union when increasing DBA$config$mergeOverlap
by
Ian D.
▴ 70
Hello. Thanks for the reply. Sorry about this. My testing is telling me that 1 is the default (a gap), not -1 (1bp overlap). Negative …
Comment: Differences in differential analysis methods for RNA-Seq
by
ATpoint
★ 4.1k
> I am just re-processing due to being uncertain about how they used the edgeR analysis to reach gene level edgeR devs published something…
Comment: Differences in differential analysis methods for RNA-Seq
by
james.zhang20
• 0
Thanks for the explanations, it has helped clarify some things. Unfortunately, I am working from an early access public dataset (https://do…
Answer: Deseq2 and Normalization of RNA sequencing data
by
ATpoint
★ 4.1k
There is no expectation of normality that is realistic in terms of expression level. Levels are widely different between genes, and counts …
Comment: Differences in differential analysis methods for RNA-Seq
by
ATpoint
★ 4.1k
MAGeCK is a command line tool that is easy to use. I recommend you use it because a) the logFCs from DESeq2 and MAGeCK will be very similar…
Votes
A: Error in DESeqDataSet : some values in assay are not integers
Bioconductor 3.19 is Released!
Bioconductor 3.19 is Released!
Answer: DEseq2 coefficient
SPIA plotP giving error
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