Bioconductor Conversion

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votes

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1.2k

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refseq Bioconductor conversion

5.2 years ago heiko_kin ▴ 60

vote

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1.8k

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software error ensemblID conversion

updated 6.6 years ago by James W. MacDonald 68k • written 6.6 years ago by mlee • 0

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2.8k

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flowcore fcs flow cytommetry matrix conversion

updated 6.6 years ago by Jake Wagner ▴ 310 • written 6.6 years ago by apurva • 0

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3.6k

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biomart entrez gene identifiers ensembl conversion

updated 7.2 years ago by Mike Smith ★ 6.6k • written 7.2 years ago by EdgeR_A_Poe ▴ 10

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2.4k

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conversion symbol entrez

updated 10.4 years ago by James W. MacDonald 68k • written 10.4 years ago by dalloliogm ▴ 50

5 results • Page 1 of 1

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Comment: GOseq Probability Weight Function bad fit by a2sahaaaq2c • 0

the mobile gaming world offers a different kind of strategic challenge. Many users today are shifting from heavy data processing to lighthe…

Comment: Postdoctoral Fellow (Computational Biology / Bioinformatics) - Neuroepigenetics by mudasarnaeem2020 • 0

Promoting UDISE+ Features on Social Media to Increase Awareness https://udisseplus.com/[enter link description here][1] [1]: https://ud…

Comment: DiffBind plot.profile error by a2sahaaaq2c • 0

To resolve technical errors like installation failures or login issues, first ensure your device allows in the security settings and that…

Comment: soGGi error by shepherl 4.3k

We have tried to contact the soGGi maintainer to have them update the package to the newer version of gglot2 but they have so far been unre…

Comment: using limma trend workflow in CAMERA by Gordon Smyth 53k

No, `trend.var=TRUE` and `trend=TRUE` are not needed in any voom pipeline, because the trend is already incorporated into the voom weights.

Votes

Answer: DiffBind differential analysis

Answer: Limma-voom sample weights and impact on DEG numbers

C: Why limma, edgeR, and DESeq did not implement fold change moderation first?

Comment: using limma trend workflow in CAMERA

C: z-score with DESeq2?

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Popular Question to Guido Hooiveld ★ 4.1k