Bioconductor Refseq

Showing : refseq • reset

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1.2k

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refseq Bioconductor conversion

5.2 years ago heiko_kin ▴ 60

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973

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RefSeq Chromosome Mutalyzer

5.8 years ago heiko_kin ▴ 60

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3.0k

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tximport Gene IDs txdb RefSeq Salmon

updated 6.0 years ago by Michael Love 43k • written 6.0 years ago by holmkn • 0

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3.5k

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edgeR ENEMBL RefSeq

updated 6.9 years ago by Gordon Smyth 53k • written 6.9 years ago by mzillur • 0

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3.2k

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genomicfeatures maketxdbfromucsc refseq

updated 9.6 years ago by Hervé Pagès 16k • written 9.6 years ago by Sebastien Vigneau ▴ 10

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4.8k

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ncbi refseq maketxdbfromgff fetchExtendedChromInfoFromUCSC genomeinfodb

updated 10.1 years ago by Hervé Pagès 16k • written 10.1 years ago by gokcen.eraslan ▴ 10

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3.8k

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promoter granges refseq ucsc organismdb

updated 10.2 years ago by Robert Castelo ★ 3.4k • written 10.2 years ago by efoss ▴ 10

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4.4k

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refseq annotationhub

updated 10.4 years ago by Martin Morgan 25k • written 10.4 years ago by dalloliogm ▴ 50

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2.1k

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customprodb dbsnp refseq varianttools

updated 10.6 years ago by xiaojing.wang ▴ 50 • written 10.6 years ago by kristenbeck527 • 0

9 results • Page 1 of 1

Recent ...

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Comment: Postdoctoral Fellow (Computational Biology / Bioinformatics) - Neuroepigenetics by mudasarnaeem2020 • 0

Promoting UDISE+ Features on Social Media to Increase Awareness https://udisseplus.com/[enter link description here][1] [1]: https://ud…

Comment: DiffBind plot.profile error by a2sahaaaq2c • 0

To resolve technical errors like installation failures or login issues, first ensure your device allows in the security settings and that…

Comment: soGGi error by shepherl 4.3k

We have tried to contact the soGGi maintainer to have them update the package to the newer version of gglot2 but they have so far been unre…

Comment: using limma trend workflow in CAMERA by Gordon Smyth 53k

No, `trend.var=TRUE` and `trend=TRUE` are not needed in any voom pipeline, because the trend is already incorporated into the voom weights.

Comment: Questions about bacon QC and correction on EWAS results by Tikaaa2sahaaaq2c • 0

In the world of mobile games, the 88ef game download has gained traction for its performance driven design [free download][1], similar to …

Votes

Answer: DiffBind differential analysis

Answer: Limma-voom sample weights and impact on DEG numbers

C: Why limma, edgeR, and DESeq did not implement fold change moderation first?

Comment: using limma trend workflow in CAMERA

C: z-score with DESeq2?

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Popular Question to Guido Hooiveld ★ 4.1k