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copy number
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0
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0
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1.1k
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cn.MOPS output - mean/median of what?
cn.MOPS
CNV
copy number
5.8 years ago
liorglic
▴ 10
0
votes
1
reply
2.0k
views
how to analyze CNV data
copy number
8.4 years ago
mms140130
• 0
0
votes
0
replies
1.0k
views
How to combine CGHcall objects
cghcall
r
cgh
copy number
8.6 years ago
kitcurtius
• 0
1
vote
1
reply
1.7k
views
Batch Correction and Normalization for champ.CNA
bioconductor
ChAMP
copy number
batch effect
normalization
updated 8.8 years ago by
rasmus.rydbirk
▴ 10 • written 8.8 years ago by
apmishra
• 0
0
votes
0
replies
1.3k
views
champ.CNA error (Error in sort(abs(diff(genomdat)))[1:n.keep])
ChAMP
champ
copy number
8.9 years ago
apmishra
• 0
2
votes
9
replies
3.4k
views
Calling amplifications and deletions from CopywriteR output
CopywriteR
copy number
updated 9.8 years ago by
t.kuilman
▴ 170 • written 9.9 years ago by
smcnulty
• 0
0
votes
0
replies
1.2k
views
Why are the raw copy numbers maxed at 5 and minned at 0 ?
crlmm
copy number
10.7 years ago
kforner
• 0
7 results • Page
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Recent ...
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Comment: Bioinformatician at the Lausanne University Hospital
by
eja.ger.m
• 0
For individuals looking to improve communication and collaboration in demanding medical or research environments like the Genetic Medicine …
Answer: NUPOP usage
by
shepherl
4.2k
You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…
Comment: How can I correctly use phyloseq with Docker?
by
fnfgame
• 0
In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …
Comment: DECIPHER DesignProbes unable to design FISH-probes
by
Erik Wright
▴ 150
Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment
by
Michael Love
43k
BTW, I tested with no issue on MacOS ARM on our previous github issue.
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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