Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
copy number
•
reset
0
votes
0
replies
1.0k
views
cn.MOPS output - mean/median of what?
cn.MOPS
CNV
copy number
5.7 years ago
liorglic
▴ 10
0
votes
1
reply
1.9k
views
how to analyze CNV data
copy number
8.3 years ago
mms140130
• 0
0
votes
0
replies
989
views
How to combine CGHcall objects
cghcall
r
cgh
copy number
8.5 years ago
kitcurtius
• 0
1
vote
1
reply
1.7k
views
Batch Correction and Normalization for champ.CNA
bioconductor
ChAMP
copy number
batch effect
normalization
updated 8.6 years ago by
rasmus.rydbirk
▴ 10 • written 8.7 years ago by
apmishra
• 0
0
votes
0
replies
1.3k
views
champ.CNA error (Error in sort(abs(diff(genomdat)))[1:n.keep])
ChAMP
champ
copy number
8.8 years ago
apmishra
• 0
2
votes
9
replies
3.3k
views
Calling amplifications and deletions from CopywriteR output
CopywriteR
copy number
updated 9.7 years ago by
t.kuilman
▴ 170 • written 9.7 years ago by
smcnulty
• 0
0
votes
0
replies
1.2k
views
Why are the raw copy numbers maxed at 5 and minned at 0 ?
crlmm
copy number
10.6 years ago
kforner
• 0
7 results • Page
1 of 1
Recent ...
Replies
Comment: "Watched Tags" are being erased rather than updated
by
shepherl
4.2k
I can reproduce this and have opened an issue on the code base https://github.com/Bioconductor/support.bioconductor.org/issues/112
Comment: "Watched Tags" are being erased rather than updated
by
shepherl
4.2k
we can investigate this issue. thank you for bringing it to our attention
Comment: deseq2 filter the low counts
by
Michael Love
43k
> But within each comparison (contrast), if I trace some DEGs back to the original salmon merged gene counts (or even to normalised counts)…
Comment: deseq2 filter the low counts
by
empty_mt
• 0
Thank you for you suggestion to look at the pre-filtering section in the DESeq2 vignettes - am I missing something? I have 6 treatments, …
Comment: deseq2 filter the low counts
by
Michael Love
43k
Have you seen this part: https://bioconductor.org/packages/release/bioc/vignettes/DESeq2/inst/doc/DESeq2.html#pre-filtering
Votes
Comment: "Watched Tags" are being erased rather than updated
Comment: deseq2 filter the low counts
Answer: DESeq2 interactions
Answer: Important: Bioconductor Release 3.22 Delayed
A: Multi-level experiments in Limma
Awards
• All
Popular Question
to
shepherl
4.2k
Popular Question
to
Hervé Pagès
16k
Popular Question
to
Ou, Jianhong
★ 1.3k
Popular Question
to
Maria Doyle
▴ 100
Popular Question
to
Gordon Smyth
53k
Locations
• All
WEHI, Melbourne, Australia,
39 minutes ago
The city by the bay,
42 minutes ago
United States,
1 hour ago
United States,
1 hour ago
United States,
1 hour ago
Traffic: 1967 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6