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Showing :
copywriter
•
reset
0
votes
2
replies
276
views
Error in if (nrow(peaks) > 0) { : argument is of length zero Calls: CopywriteR ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous> Execution h…
CopywriteR
CopyhelpeR
25 days ago • updated 20 days ago
fer_talavera
• 0
0
votes
1
reply
540
views
CopywriteR output
CopywriteR
updated 20 days ago by
fer_talavera
• 0 • written 2.5 years ago by
Joshua
• 0
2
votes
4
replies
879
views
CopywriteR job runs out of memory
copywriter
cnv
updated 4.0 years ago by
oscarkrijgsman
▴ 20 • written 4.0 years ago by
Ram
▴ 190
0
votes
1
reply
892
views
CopywriteR - low coverage-regions display very low numbers
copywriter
copynumber
updated 5.6 years ago by
t.kuilman
▴ 170 • written 5.6 years ago by
magdaaverte
• 0
3
votes
12
replies
2.0k
views
S4Vectors and subectHits error
s4vectors
copywriter
updated 6.0 years ago by
Michael Lawrence
★ 11k • written 6.0 years ago by
TriS
▴ 200
1
vote
2
replies
1.7k
views
BiocParallel and CopywriteR Error
bioconductor
biocparallel
copywriter
updated 6.8 years ago by
Martin Morgan
25k • written 6.8 years ago by
genomic8328
▴ 10
0
votes
1
reply
1.1k
views
Problems with CopywriteR
copywriter
updated 7.1 years ago by
t.kuilman
▴ 170 • written 7.1 years ago by
filipzembol
• 0
0
votes
1
reply
1.5k
views
CopywriteR: CNV calling on normals samples / gaps in chromosomes
copynumber
cnvtools
cnv
copywriteR
updated 7.7 years ago by
t.kuilman
▴ 170 • written 7.7 years ago by
ahinsahr11
• 0
0
votes
3
replies
1.4k
views
CopywriteR error: "Error in .Method"
CopywriteR
7.8 years ago
Tom
▴ 10
1
vote
3
replies
1.4k
views
CopywriteR can't finish calculating copy number
copywriter
bam
updated 7.9 years ago by
t.kuilman
▴ 170 • written 7.9 years ago by
thestaroceanster
• 0
3
votes
3
replies
3.8k
views
Preparing CopywriteR output for GISTIC 2.0 analysis
copywriter
updated 8.2 years ago by
t.kuilman
▴ 170 • written 8.2 years ago by
jcarter
• 0
2
votes
4
replies
2.3k
views
Visualizing CopywriteR's segmentation output in IGV
copywriter
dnacopy
updated 8.2 years ago by
t.kuilman
▴ 170 • written 8.2 years ago by
jcarter
• 0
1
vote
2
replies
1.3k
views
Copywriter output looks strange
copywriter
8.2 years ago
MatthewGField
▴ 10
2
votes
9
replies
2.4k
views
Calling amplifications and deletions from CopywriteR output
CopywriteR
copy number
updated 8.2 years ago by
t.kuilman
▴ 170 • written 8.2 years ago by
smcnulty
• 0
0
votes
7
replies
2.0k
views
Multithreading CopywriteR on SLURM cluster
copywriter
slurm
openMPI
updated 8.2 years ago by
t.kuilman
▴ 170 • written 8.2 years ago by
smcnulty
• 0
0
votes
1
reply
1.3k
views
CopywriteR - choosing optimal bin size for targeted sequencing panel
copywriter
bin size
targeted sequencing
updated 8.2 years ago by
t.kuilman
▴ 170 • written 8.2 years ago by
sshung
• 0
2
votes
1
reply
1.2k
views
Copyhelper: Preprocession of mappability
CopywriteR
updated 8.3 years ago by
t.kuilman
▴ 170 • written 8.3 years ago by
Felix
• 0
17 results • Page
1 of 1
Recent ...
Replies
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
by
winwater0928
• 0
Thank you for your comment! I'll review my code from top to bottom.
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
So basically you are using HTML markup to set your subscripts and whatnot, and then `element_markdown` does the rest.
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Oh snap. Foiled again. Here it is with spaces & ge ; and & lt ;
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Oh LOL. My markdown got edited by the markdown editor! What is between the p and 50 in the first case is the HTML for greater than or equal…
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Ah, good point. You could instead try ``` > library(ggtext) > keyvals.shape = c(rep(3,10), rep(2,8)) > names(keyvals.shape) = ifelse(keyva…
Votes
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
Comment: biomaRt : No lock file for BiocFileCache
Answer: Cross-species analysis - how to compute the mid parent value?
Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
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