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Showing :
copywriter
•
reset
0
votes
0
replies
368
views
CopywriteR output
CopywriteR
22 months ago
Joshua
• 0
2
votes
4
replies
671
views
CopywriteR job runs out of memory
copywriter
cnv
updated 3.4 years ago by
oscarkrijgsman
▴ 20 • written 3.4 years ago by
Ram
▴ 180
0
votes
1
reply
735
views
CopywriteR - low coverage-regions display very low numbers
copywriter
copynumber
updated 5.0 years ago by
t.kuilman
170 • written 5.0 years ago by
magdaaverte
• 0
3
votes
12
replies
1.7k
views
S4Vectors and subectHits error
s4vectors
copywriter
updated 5.4 years ago by
Michael Lawrence
11k • written 5.4 years ago by
TriS
▴ 200
1
vote
2
replies
1.6k
views
BiocParallel and CopywriteR Error
bioconductor
biocparallel
copywriter
updated 6.2 years ago by
Martin Morgan
25k • written 6.2 years ago by
genomic8328
▴ 10
0
votes
1
reply
896
views
Problems with CopywriteR
copywriter
updated 6.5 years ago by
t.kuilman
170 • written 6.5 years ago by
filipzembol
• 0
0
votes
1
reply
1.3k
views
CopywriteR: CNV calling on normals samples / gaps in chromosomes
copynumber
cnvtools
cnv
copywriteR
updated 7.1 years ago by
t.kuilman
170 • written 7.2 years ago by
ahinsahr11
• 0
0
votes
3
replies
1.2k
views
CopywriteR error: "Error in .Method"
CopywriteR
7.2 years ago
Tom
▴ 10
1
vote
3
replies
1.1k
views
CopywriteR can't finish calculating copy number
copywriter
bam
updated 7.3 years ago by
t.kuilman
170 • written 7.3 years ago by
thestaroceanster
• 0
3
votes
3
replies
3.4k
views
Preparing CopywriteR output for GISTIC 2.0 analysis
copywriter
updated 7.6 years ago by
t.kuilman
170 • written 7.6 years ago by
jcarter
• 0
2
votes
4
replies
2.0k
views
Visualizing CopywriteR's segmentation output in IGV
copywriter
dnacopy
updated 7.6 years ago by
t.kuilman
170 • written 7.6 years ago by
jcarter
• 0
1
vote
2
replies
1.1k
views
Copywriter output looks strange
copywriter
7.6 years ago
MatthewGField
▴ 10
2
votes
9
replies
2.1k
views
Calling amplifications and deletions from CopywriteR output
CopywriteR
copy number
updated 7.6 years ago by
t.kuilman
170 • written 7.6 years ago by
smcnulty
• 0
0
votes
7
replies
1.8k
views
Multithreading CopywriteR on SLURM cluster
copywriter
slurm
openMPI
updated 7.6 years ago by
t.kuilman
170 • written 7.6 years ago by
smcnulty
• 0
0
votes
1
reply
1.1k
views
CopywriteR - choosing optimal bin size for targeted sequencing panel
copywriter
bin size
targeted sequencing
updated 7.6 years ago by
t.kuilman
170 • written 7.6 years ago by
sshung
• 0
2
votes
1
reply
1.1k
views
Copyhelper: Preprocession of mappability
CopywriteR
updated 7.7 years ago by
t.kuilman
170 • written 7.7 years ago by
Felix
• 0
16 results • Page
1 of 1
Recent ...
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Answer: ukb Chromosomal position information was converted into SNPS
by
James W. MacDonald
63k
In my work, we almost always convert RSIDs to chr:pos because the former is ambiguous and changing whereas the latter is not. Which is like…
Comment: T.fit function of maSigPro returns error message
by
hanna.g
• 0
Addition to the issue above: the T.fit function works only when choosing the step.method = "forward", for whatever reason. Maybe this clue …
Answer: Deseq2, enrichGO and ensembl ID
by
James W. MacDonald
63k
1. There isn't a keytype alternative. You need the gene IDs. 2. Convert the `rownames` of your 'se' object, or the `rownames` of your `D…
Comment: Doubts regarding Pathview
by
loyedbend2811
• 0
I thoroughly enjoyed reading your essay, and it was quite beneficial to me. Please join me in [monopoly online][1] if you have the time. …
Comment: ukb Chromosomal position information was converted into SNPS
by
wenbo
• 0
Hi, I downloaded uk biobank data, but I don't know how to use R to convert chromosome position information to rs
Votes
Answer: MDS plot edgeR
A: legend with gradient in ComplexHeatmap
Comment: comparing contrasts in edger/lima using makeContrasts function
Answer: comparing contrasts in edger/lima using makeContrasts function
Answer: Differential expression analysis with only FPKM matrix available from total newb
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