Showing : curl • reset
0
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5
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Bioconductor unable to update 'curl'
curl HELP
9 months ago kagodwi2 • 0
0
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0
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1.3k
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SSL connect error in e.g. pathview from R version 4 in Windows 10
pathview SSL curl
2.5 years ago Matthias • 0
1
vote
1
reply
2.8k
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Error in curl; timeout when using biomaRt
biomaRt curl timeout getBM Bioconductor
updated 4.4 years ago by ★ 1.4k • written 4.4 years ago by • 0
1
vote
8
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13k
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BioMart: curl option when using getBM in loop
curl biomart getBM Tutorial
updated 5.8 years ago by 68k • written 5.8 years ago by ▴ 10
1
vote
5
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3.3k
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Curl error on ensembl biomaRt access
biomaRt curl
6.3 years ago fca.collin • 0
0
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5
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3.3k
views
getBM in loop
biomart ensembl curl
updated 8.0 years ago by ★ 6.6k • written 8.1 years ago by ▴ 40
4
votes
3
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2.3k
views
Error installing AnnotationHub on Fedora
Annotationhub curl httr fedora
updated 9.7 years ago by ▴ 30 • written 10.4 years ago by ▴ 10
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Answer: When to use edgeR or limma by Gordon Smyth 53k
The short answer is that we generally prefer edgeR for applications with lots of small counts and limma for complex designs with random eff…
Comment: limpa-blank normalization and Spectronaut's PTM stoichiometry by Gordon Smyth 53k
I updated the above answer today.
Answer: When to use edgeR or limma by James W. MacDonald 68k
I would use edgeR's quasi-likelihood model for any analysis with a smaller number of observations (like 3 vs 3 or similar), but if you have…
Answer: limpa-blank normalization and Spectronaut's PTM stoichiometry by Gordon Smyth 53k
The short answer is that limpa reads standard feature-level intensities from Spectronaut or other quantifications tools. limpa is designed …
Comment: Question about the filterByExpr function inputs in edgeR by mohammedtoufiq91 ▴ 10
@gordonsmyth Noted, thank you very much.
Votes
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
A: deseq2 - paired samples in 2 sequencing types with very different library sizes
Comment: Question about the filterByExpr function inputs in edgeR
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