Bioconductor Curl

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curl HELP

5 months ago kagodwi2 • 0

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pathview SSL curl

2.1 years ago Matthias • 0

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biomaRt curl timeout getBM Bioconductor

updated 4.0 years ago by swbarnes2 ★ 1.4k • written 4.0 years ago by nlin0907 • 0

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curl biomart getBM Tutorial

updated 5.4 years ago by James W. MacDonald 68k • written 5.5 years ago by Ni-Ar ▴ 10

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biomaRt curl

6.0 years ago fca.collin • 0

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biomart ensembl curl

updated 7.7 years ago by Mike Smith ★ 6.6k • written 7.7 years ago by Tiphaine Martin ▴ 40

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Annotationhub curl httr fedora

updated 9.3 years ago by anastazie.d ▴ 30 • written 10.0 years ago by barashe ▴ 10

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Comment: How to account for solvent controls in DESeq2 when comparing follicular vs lutea by snijesh ▴ 200

I would like to clarify whether the command `res <- results(dds, name = "phaseLP.conditionTreated")` is the correct approach to generate …

Comment: How to account for solvent controls in DESeq2 when comparing follicular vs lutea by James W. MacDonald 68k

Not sure I understand. You ask how to do something and then show how one would do so.

Comment: DiffBind getting Fold values of near 0 by littlefishes20 ▴ 10

Same issues. All peaks return to a fold near 0, although they are significant when visualizing in IGV. Please find the MAplot and volcanoPl…

Comment: How to account for solvent controls in DESeq2 when comparing follicular vs lutea by snijesh ▴ 200

I have checked DEGs between Solvent Control (SC) of FP and LP and there are noticebale differences in terms of DEGs. ``` # Checking SC in …

Answer: A0A287BB68 not recognized as UNPROT key in org.Ss.eg.db using AnnotationDbi::sel by James W. MacDonald 68k

Apparently it's been over-ridden by a different UniProtKB ID ``` > select(org.Ss.eg.db, "MYH11", "UNIPROT", "SYMBOL") 'select()' retu…

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How to account for solvent controls in DESeq2 when comparing follicular vs luteal phase?

Answer: How to account for solvent controls in DESeq2 when comparing follicular vs lutea

Comment: Using DESeq2 on single cell RNA Seq data of same cell type but different conditi

Can NanoString data be analyzed using DESeq2?

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Popular Question to Robert Castelo ★ 3.4k