Bioconductor Customcdf

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affy oligo customcdf

9.4 years ago • updated 9.1 years ago rishi.dasroy ▴ 20

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2.5k

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hta customcdf

updated 7.2 years ago by James W. MacDonald 65k • written 7.2 years ago by pbachali ▴ 50

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1.7k

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oligo pdinfobuilder pd.mogene.1.1.st customcdf

updated 7.6 years ago by James W. MacDonald 65k • written 8.1 years ago by Guido Hooiveld ★ 3.9k

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5.6k

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oligo customcdf HTA frma

updated 8.6 years ago by James W. MacDonald 65k • written 8.6 years ago by sanj ▴ 20

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2.5k

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microarray oligo cdf customcdf

updated 8.4 years ago by Guido Hooiveld ★ 3.9k • written 8.4 years ago by Nathaniel ▴ 20

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3.2k

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customcdf affymetrix microarrays hgu133plus2 affy

6.3 years ago rahil ▴ 30

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1.2k

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justrma customCDF segfault

updated 5.3 years ago by Daniel ▴ 10 • written 8.5 years ago by maria.lehtivaara • 0

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879

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gcrma CustomCDF Affyhgu133aExpr limma affy

updated 12 months ago by James W. MacDonald 65k • written 12 months ago by Pratik Mehta ▴ 10

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945

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customcdf R microarray

updated 7.3 years ago by James W. MacDonald 65k • written 7.3 years ago by 12021560-002 • 0

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1.1k

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Annotation GO CustomCDF cdf gcrma Annotation GO CustomCDF cdf gcrma

updated 14.4 years ago by James W. MacDonald 65k • written 14.4 years ago by Yair Benita ▴ 80

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1.6k

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oligo brainarray rma customcdf

updated 7.2 years ago by James W. MacDonald 65k • written 7.2 years ago by lcordeiro • 0

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839

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customcdf

updated 7.3 years ago by James W. MacDonald 65k • written 7.3 years ago by 12021560-002 • 0

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1.9k

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sva ComBat customcdf affymetrix microarrays limma

8.2 years ago svlachavas ▴ 830

13 results • Page 1 of 1

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Answer: Dominance Index for Shotgun Metagenomics Data by Leo Lahti ▴ 30

1. Note that Simpson's dominance index (\lambda) is a different index than inverse Simpson (1/\lambda) or reciprocal Simpson (1-\lambda). T…

Comment: Math expression in shapeCustom legend in EnhancedVolcano by pl23 • 0

Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …

Answer: PCA plot suggestions by Michael Love 41k

For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…

Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length by ussarizona ▴ 10

Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…

Answer: Deseq2. decontXcounts not integers. Useful alternative? by Michael Love 41k

Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…

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Answer: Math expression in shapeCustom legend in EnhancedVolcano

Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length

Comment: Deseq2. decontXcounts not integers. Useful alternative?

Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)

biomaRt error: database disk image is malformed

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