Bioconductor Cytofworkflow

Showing : cytofworkflow • reset

votes

replies

1.4k

views

CATALYST cytofWorkflow

updated 4.5 years ago by Martin Morgan 25k • written 4.5 years ago by Brent.OCarrigan • 0

vote

487

views

FlowSOM cytofWorkflow

updated 13 months ago by helucro ▴ 70 • written 13 months ago by Anirban • 0

votes

replies

600

views

cytofWorkflow diffcyt

3.5 years ago GFM ▴ 20

votes

replies

662

views

cytofWorkflow cytofworkflow flowCore

3.5 years ago GFM ▴ 20

votes

replies

520

views

cytofWorkflow

3.4 years ago achaillon • 0

votes

replies

717

views

cytofWorkflow cytof diffcyt

3.4 years ago achaillon • 0

votes

replies

887

views

grou heatmaps CyTOFpower cytofWorkflow

14 months ago shuangshuang • 0

votes

903

views

cytofWorkflow

updated 5.6 years ago by James W. MacDonald 65k • written 5.6 years ago by o.hunewald • 0

votes

961

views

cytofWorkflow

updated 14 months ago by helucro ▴ 70 • written 14 months ago by shuangshuang • 0

votes

613

views

cytofworkflow

4.5 years ago jianjunchencn • 0

10 results • Page 1 of 1

Recent ...

Replies

Comment: Why does GSEA on edgeR results for randomized samples give highly significant p- by Chris • 0

Thanks Gordon for the advice! I ran fgsea, gsva and camera(), the most significant pathways are different. For the purpose of finding pathw…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 41k

Check the number of bootstrapped data per chromosome compared to the original, and then you can also look at its distribution. For this it'…

Comment: DNAString: Standard checksum function? by Henrik Bengtsson ★ 2.4k

For completeness: SEGUID v2 (https://www.seguid.org/), implemented in CRAN package **[seguid](https://cran.r-project.org/package=seguid)*…

Comment: fgsea significant result by Chris • 0

Thanks ATpoint! Setting a fixed seed can reproduce the same result. However, if someone else analyze the same data with different seed, the…

Comment: SGSeq: moving toward diffex from SGSeq analysis by Sara • 0

Thank you for your response. I have another question about saving the sgvc result as a CSV file. I would appreciate your help, please. ``` …

Votes

Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-

Handling multiple differential expression comparisons

Answer: fgsea significant result

package goseq seems to be not available on the latest version of R

Awards • All

Scholar to ATpoint ★ 4.1k