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david
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Bioconductor package to access DAVID tool
DAVID
updated 4.4 years ago by
shepherl
4.3k • written 4.4 years ago by
deepue
▴ 10
0
votes
0
replies
1.3k
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RDAVIDWebService - unable to use getFunctionalAnnotationChart with "count = 0"
rdavidwebservice
david
7.5 years ago
rdalbanus
• 0
13
votes
35
replies
19k
views
RDAVIDWebService Error 301: Moved Permanently
rdavidwebservice
david
updated 7.5 years ago by
gevermalc
• 0 • written 10.5 years ago by
Vivek.b
▴ 100
1
vote
4
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2.0k
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Upregulation and Downregulation of Gene Ontology terms
microarray
david
differential gene expression
GO
7.8 years ago
seendey16
• 0
0
votes
0
replies
2.0k
views
gene over-representation analysis with custom background
pathway analysis
over-representation analysis
DAVID
pantherDB
consensuspathDB
9.1 years ago
smt8n
• 0
1
vote
0
replies
1.4k
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How can I connect to DAVID 6.8 Beta through RDAVIDWebService
RDAVIDWebService
david
9.5 years ago
umut.caglar
▴ 10
3
votes
8
replies
12k
views
RDAVIDWebService - Unable to sendViaPost to url etc etc - server time out
software error
david
rdavidwebservice
updated 10.4 years ago by
oops324
• 0 • written 10.8 years ago by
TriS
▴ 200
0
votes
1
reply
2.4k
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RDAVIDWebService Package - Uploading a gene list using data()
rdavidwebservice
david
differential gene expression
annotation
updated 11.0 years ago by
Dan Tenenbaum
★ 8.2k • written 11.0 years ago by
hpw9
• 0
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Answer: When to use edgeR or limma
by
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68k
I would use edgeR's quasi-likelihood model for any analysis with a smaller number of observations (like 3 vs 3 or similar), but if you have…
Answer: Quality control of shotgun metagenomics data
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This support site is meant primarily for helping people with technical questions about using Bioconductor packages. For general analysis qu…
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limpa reads standard feature-level output from Spectronaut. You do not need to make any changes to the output before reading it into limpa.…
Comment: Question about the filterByExpr function inputs in edgeR
by
mohammedtoufiq91
▴ 10
@gordonsmyth Noted, thank you very much.
Comment: Question about the filterByExpr function inputs in edgeR
by
Gordon Smyth
53k
Regarding edgeR v4 filtering, I didn't mention anything about a minimum count of 10 but rather said "a positive count". So a minimalistic f…
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Comment: Question about the filterByExpr function inputs in edgeR
Answer: Question about the filterByExpr function inputs in edgeR
Answer: Question about the filterByExpr function inputs in edgeR
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