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david
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Bioconductor package to access DAVID tool
DAVID
updated 2.7 years ago by
shepherl
3.8k • written 2.7 years ago by
deepue
▴ 10
0
votes
0
replies
869
views
RDAVIDWebService - unable to use getFunctionalAnnotationChart with "count = 0"
rdavidwebservice
david
5.7 years ago
rdalbanus
• 0
13
votes
35
replies
16k
views
RDAVIDWebService Error 301: Moved Permanently
rdavidwebservice
david
updated 5.8 years ago by
gevermalc
• 0 • written 8.8 years ago by
Vivek.b
▴ 100
1
vote
4
replies
1.4k
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Upregulation and Downregulation of Gene Ontology terms
microarray
david
differential gene expression
GO
6.1 years ago
seendey16
• 0
0
votes
0
replies
1.3k
views
gene over-representation analysis with custom background
pathway analysis
over-representation analysis
DAVID
pantherDB
consensuspathDB
7.4 years ago
smt8n
• 0
1
vote
0
replies
1.0k
views
How can I connect to DAVID 6.8 Beta through RDAVIDWebService
RDAVIDWebService
david
7.8 years ago
umut.caglar
▴ 10
3
votes
8
replies
10k
views
RDAVIDWebService - Unable to sendViaPost to url etc etc - server time out
software error
david
rdavidwebservice
updated 8.7 years ago by
oops324
• 0 • written 9.1 years ago by
TriS
▴ 200
0
votes
1
reply
1.8k
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RDAVIDWebService Package - Uploading a gene list using data()
rdavidwebservice
david
differential gene expression
annotation
updated 9.2 years ago by
Dan Tenenbaum
★ 8.2k • written 9.2 years ago by
hpw9
• 0
8 results • Page
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Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
pl23
• 0
Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …
Answer: PCA plot suggestions
by
Michael Love
41k
For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
by
ussarizona
▴ 10
Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…
Answer: Deseq2. decontXcounts not integers. Useful alternative?
by
Michael Love
41k
Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…
Answer: ATACseq merge peaks
by
ATpoint
★ 4.0k
That depends on your analysis. Typically, for differential analysis (and convenience) you would produce a single set of peaks (e.g. by merg…
Votes
Answer: Math expression in shapeCustom legend in EnhancedVolcano
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
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