Bioconductor Decidetests

Showing : decidetests • reset

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751

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decideTests topTable limma

updated 10 months ago by Gordon Smyth 50k • written 10 months ago by Anna ▴ 20

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612

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edgeR voom decidetests DEG

updated 13 months ago by Gordon Smyth 50k • written 13 months ago by Ankita • 0

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1.2k

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limma eBayes decideTests topTable

updated 4.2 years ago by Gordon Smyth 50k • written 4.2 years ago by irene.roman • 0

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1.3k

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limma stageR decideTests

updated 5.3 years ago by Koen Van den Berge ▴ 180 • written 5.3 years ago by maltethodberg ▴ 180

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779

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limma decidetests

updated 5.5 years ago by Gordon Smyth 50k • written 5.5 years ago by Ryan C. Thompson ★ 7.9k

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1.5k

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limma anova decidetests

updated 5.6 years ago by Gordon Smyth 50k • written 5.6 years ago by mikhael.manurung ▴ 270

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1.2k

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limma decidetests

updated 6.5 years ago by Aaron Lun ★ 28k • written 6.5 years ago by jamie.gearing ▴ 60

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973

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limma decidetests

updated 7.5 years ago by Gordon Smyth 50k • written 7.5 years ago by ahmed.asadik • 0

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1.6k

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limma decidetests

updated 7.6 years ago by Axel Klenk ★ 1.0k • written 7.6 years ago by bi_Scholar • 0

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1.3k

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limma decidetests methylation

updated 8.2 years ago by Sean Davis 21k • written 8.2 years ago by kraiczy ▴ 10

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3.1k

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rnaseq decideTests limma qvalue

8.9 years ago anver • 0

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5.0k

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limma B stats decideTests

updated 21 months ago by krushnach80 • 0 • written 9.0 years ago by Elsa • 0

12 results • Page 1 of 1

Recent ...

Replies

Answer: Method to find pathways different between 2 groups by Robert Castelo ★ 3.3k

Hi, regarding how could you combine the result from each tool, one option is using a so-called "ensembl method", for instance, the package …

Answer: Couldn't connect to server while using "pathways" by James W. MacDonald 65k

As ATpoint already noted, you should proceed from the assumption that your audience knows nothing about what you are doing, and provide eno…

Answer: Trim/Filter out-of-bounds GRanges by Michael Love 41k

https://support.bioconductor.org/p/73432/#73448

Comment: Couldn't connect to server while using "pathways" by Michael Love 41k

You've put the tag "DESeq2" which results in an email to the maintainer, me, that I should respond to a post on the support site. Can you …

Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it by Vincent J. Carey, Jr. 6.7k

btw that was run on M1 mac

Votes

Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-

Answer: Method to find pathways different between 2 groups

Comment: Trying to use enrichGO

Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-

Handling multiple differential expression comparisons

Awards • All

Popular Question to Vincent J. Carey, Jr. 6.7k

Scholar to ATpoint ★ 4.1k