Bioconductor Decidetests

Showing : decidetests • reset

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714

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decideTests topTable limma

updated 9 months ago by Gordon Smyth 50k • written 9 months ago by Anna ▴ 20

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581

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edgeR voom decidetests DEG

updated 12 months ago by Gordon Smyth 50k • written 12 months ago by Ankita • 0

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1.2k

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limma eBayes decideTests topTable

updated 4.1 years ago by Gordon Smyth 50k • written 4.2 years ago by irene.roman • 0

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1.2k

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limma stageR decideTests

updated 5.2 years ago by Koen Van den Berge ▴ 180 • written 5.2 years ago by maltethodberg ▴ 170

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761

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limma decidetests

updated 5.5 years ago by Gordon Smyth 50k • written 5.5 years ago by Ryan C. Thompson ★ 7.9k

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1.4k

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limma anova decidetests

updated 5.5 years ago by Gordon Smyth 50k • written 5.6 years ago by mikhael.manurung ▴ 270

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1.2k

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limma decidetests

updated 6.5 years ago by Aaron Lun ★ 28k • written 6.5 years ago by jamie.gearing ▴ 60

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955

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limma decidetests

updated 7.4 years ago by Gordon Smyth 50k • written 7.4 years ago by ahmed.asadik • 0

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1.6k

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limma decidetests

updated 7.6 years ago by Axel Klenk ★ 1.0k • written 7.6 years ago by bi_Scholar • 0

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1.2k

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limma decidetests methylation

updated 8.1 years ago by Sean Davis 21k • written 8.1 years ago by kraiczy ▴ 10

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3.0k

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rnaseq decideTests limma qvalue

8.9 years ago • updated 8.8 years ago anver • 0

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4.9k

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limma B stats decideTests

updated 20 months ago by krushnach80 • 0 • written 9.0 years ago by Elsa • 0

12 results • Page 1 of 1

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Comment: Light difference when using coef vs omit a group when compare 3 groups. by Chris • 0

Hi Gordon, this is the MDS plot at genes level. I don't have the raw data but I think the normalized data. So can we say from the plot that…

Comment: How to correct for known and surrogate variables in DESeq2? by Michael Love 41k

To question 3: if you model technical variation using only ~group vs ~1, then it will be correlated with known technical variables, which y…

Answer: flowStats Search Error by shepherl 3.8k

We are aware of an issue with bioconductor.org search and are investigating. We apologize for an inconvenience this is causing.

Comment: How to correct for known and surrogate variables in DESeq2? by nhaus ▴ 30

Hey Crystal, did you end up getting advice? I am facing the exact same questions that you are having right now. Would be very grateful if y…

Answer: List of Deprecated Packages for Bioc3.18 by shepherl 3.8k

previously unannounced, COHCAP is not deprecated but removed with release 3.19. see [mailing list discussion](https://stat.ethz.ch/piperm…