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Showing :
eBayes
•
reset
9
votes
4
replies
2.0k
views
Limma outputs different results for same sample?
topTable
MicroarrayData
ebayes
limma
Microarray
5.0 years ago
snijesh
▴ 200
0
votes
5
replies
2.2k
views
eBayes options and decideTests method
limma
eBayes
decideTests
topTable
updated 6.0 years ago by
Gordon Smyth
53k • written 6.0 years ago by
irene.roman
• 0
0
votes
6
replies
2.9k
views
eBayes(fit_object, trend = T) gives: Error in fitFDist(var, df1 = df, covariate = covariate) : NA covariate values not allowed
limma
eBayes
updated 7.0 years ago by
Gordon Smyth
53k • written 7.0 years ago by
Sebastian Hesse
▴ 70
3
votes
1
reply
2.4k
views
Limma without eBayes, is it indistunguishable from Ordinary Least Square?
Limma
ebayes
bayesian
ls
updated 21 months ago by
Gordon Smyth
53k • written 7.4 years ago by
CantExitVIM
▴ 10
1
vote
7
replies
2.5k
views
model.matrix from GDS data
model.matrix
lmFit
eBayes
GEOquery
limma
8.0 years ago
darthratus
• 0
1
vote
2
replies
1.9k
views
Limma Ebayes on SILAC data
ebayes
limma
bioconductor
updated 8.3 years ago by
Gordon Smyth
53k • written 8.3 years ago by
reventropy2003
▴ 10
0
votes
6
replies
2.9k
views
Error in last step of Limma analysis (eBayes)
ebayes
limma
8.4 years ago
peirinl
• 0
1
vote
3
replies
2.2k
views
Error from eBayes in limma package
eBayes
limma
error
updated 8.6 years ago by
James W. MacDonald
68k • written 8.6 years ago by
calen.p.ryan
• 0
2
votes
2
replies
2.1k
views
Can one get LSMeans and expression confidence intervals from limma and voom?
ebayes
limma
voom
9.0 years ago
bag59
• 0
4
votes
2
replies
2.6k
views
error in Limma analysis - estimated df (df.0) for prior value of variance (s2.post) is Inf
limma
ebayes
updated 2.9 years ago by
Gordon Smyth
53k • written 9.1 years ago by
cemcdono
• 0
1
vote
1
reply
1.3k
views
Limma ebayes function error without any messages
limma
ebayes
updated 10.3 years ago by
Aaron Lun
★ 29k • written 10.3 years ago by
bharata1803
▴ 60
3
votes
3
replies
2.2k
views
Sub : Limma ebayes
limma
ebayes
statistical inference
updated 10.6 years ago by
Gordon Smyth
53k • written 10.6 years ago by
ssrajan86
• 0
0
votes
1
reply
1.7k
views
LmFit and eBayes on merged ESET giving errors
limma
eset
error
ebayes
updated 10.6 years ago by
James W. MacDonald
68k • written 10.6 years ago by
Vani
▴ 20
6
votes
5
replies
2.4k
views
Limma ebayes returns a list with Affy pd.hugene.2.0.st arrays
ebayes
expression
affymetrix
pd.hugene.2.0.st
limma
updated 11.1 years ago by
Gordon Smyth
53k • written 11.1 years ago by
Paulo Nuin
▴ 200
14 results • Page
1 of 1
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Replies
Comment: Can sample-level weights be used when analysing GSVA scores in limma?
by
A.Barden
▴ 20
Thanks both for this useful information.
Comment: Reproducibility of code in various Bioconductor versions
by
Gordon Smyth
53k
SNPlocs.Hsapiens.dbSNP155.GRCh38 is available for download from the same location as always. It has not changed since Bioc 3.20: Presumabl…
Comment: Changing multiple display parameters of a specific exon in GeneRegionTrack
by
a2a2hd42aa
• 0
Similarly, for structural complexity in the [He777 Game][1] APK, having precise control over every detail is what makes a high-performance …
Answer: Issue loading and downloading Bioconductor 3.22 packages after update
by
strawberry3
• 0
Hi, thank you all for the advice. Using James's advice, I managed to install SNPlocs.Hsapiens.dbSNP155.GRCh38, but it took almost half an …
Answer: Issue loading and downloading Bioconductor 3.22 packages after update
by
James W. MacDonald
68k
As Robert and ATpoint have mentioned, you need to allow more time to download a large file like this. ``` > options(timeout = 5e5) > l…
Votes
Answer: Can sample-level weights be used when analysing GSVA scores in limma?
Answer: Can sample-level weights be used when analysing GSVA scores in limma?
Comment: Can sample-level weights be used when analysing GSVA scores in limma?
Answer: Issue loading and downloading Bioconductor 3.22 packages after update
Answer: Issue loading and downloading Bioconductor 3.22 packages after update
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