Biostar EBayes

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407

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topTable MicroarrayData ebayes limma Microarray

11 months ago snijesh • 0

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329

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limma eBayes decideTests topTable

updated 23 months ago by Gordon Smyth 44k • written 23 months ago by irene.roman • 0

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522

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limma eBayes

updated 2.9 years ago by Gordon Smyth 44k • written 2.9 years ago by Sebastian Hesse ▴ 50

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549

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Limma ebayes bayesian ls

updated 3.3 years ago by Gordon Smyth 44k • written 3.3 years ago by CantExitVIM ▴ 10

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774

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model.matrix lmFit eBayes GEOquery limma

3.9 years ago darthratus • 0

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815

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ebayes limma bioconductor

updated 4.2 years ago by Gordon Smyth 44k • written 4.2 years ago by reventropy2003 ▴ 10

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1.1k

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ebayes limma

4.3 years ago peirinl • 0

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1.0k

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eBayes limma error

updated 4.5 years ago by James W. MacDonald 58k • written 4.5 years ago by calen.p.ryan • 0

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937

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ebayes limma voom

4.9 years ago bag59 • 0

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1.2k

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limma ebayes

updated 5.0 years ago by Gordon Smyth 44k • written 5.0 years ago by cemcdono • 0

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619

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limma ebayes

updated 6.2 years ago by Aaron Lun ★ 27k • written 6.2 years ago by bharata1803 ▴ 40

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1.2k

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limma ebayes statistical inference

updated 6.5 years ago by Gordon Smyth 44k • written 6.5 years ago by ssrajan86 • 0

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895

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limma eset error ebayes

updated 6.5 years ago by James W. MacDonald 58k • written 6.5 years ago by Vani ▴ 20

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1.2k

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ebayes expression affymetrix pd.hugene.2.0.st limma

updated 7.0 years ago by Gordon Smyth 44k • written 7.0 years ago by Paulo Nuin ▴ 200

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Comment: DiffBind dba.count Error in if (sum(tokeep) < length(tokeep)) by tjhwangxiong • 0

``` https://drive.google.com/drive/folders/1787thVatZpt_KFrfXY-aXV1m0FRm8Mhm?usp=sharing ``` Thanks for your reply. I have uploaded the fil…

Comment: Trying to follow a gene set analyisis in R by Michael Love 35k

No I can’t help with exercises. Just to be clear I’m not affiliated with Harvard and have no supported effort in relation to the edx classe…

Answer: Problems to find the pvalues via rowttests by Gordon Smyth 44k

Ordinary t-tests aren't recommended for genomic analyses because they have poor power and higher false discovery rates. Using the limma p…

Answer: How to insert a qvalues column in a dataframe with pvalues in R by Gordon Smyth 44k

Here and in a previous post, it seems you're not using recommended Bioconductor workflows for Affymetrix microarrays. If you used a standar…

Comment: Trying to follow a gene set analyisis in R by leonardorosas2001 • 0

Thank you. I hope I can still let you know if I have issues with your exercises. They are very challenging but useful! :)

Votes

Answer: Problems to find the pvalues via rowttests

A: How to use subSeq with DNAStringSet and information of GroupedIRanges?

Annotating GRanges with TxDb gene models using plyranges

plyranges select() when a metadata column is shared with core variable

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