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diffSplice limma

4.3 years ago jamie.gearing ▴ 60

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1.2k

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limma diffSplice

updated 5.1 years ago by Gordon Smyth 53k • written 5.1 years ago by gerberst • 0

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1.8k

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differential exon usage exon array analysis annotation hta2.0 diffsplice

updated 8.2 years ago by James W. MacDonald 68k • written 8.2 years ago by relathman ▴ 20

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1.5k

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limma diffSplice

updated 8.6 years ago by Gordon Smyth 53k • written 8.6 years ago by willj ▴ 30

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4.1k

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edgeR limma diffSplice DEXSeq

updated 9.3 years ago by Charity Law ▴ 90 • written 9.3 years ago by maltethodberg ▴ 180

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1.4k

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limma diffSplice plotSplice exons annotation

10.2 years ago Jose M Garcia Manteiga ▴ 310

6 results • Page 1 of 1

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Answer: Integration: Paired-end vs healthy single-end from a different source by wba64023 • 0

Interesting comparison! The source differences can definitely impact read quality and bias. Curious to see how you handle normalization bet…

Comment: Could we detect difference at pathway level but not significant different at gen by wba64023 • 0

thanks for sharing! [slope 2][1] [1]: https://slope2.online

Comment: After running samtools, the featureCounts command crashed. by eja.gssssse.r.m • 0

The buffer overflow detected error in your featureCount step usually indicates that the program is trying to write more data into memory …

Comment: gene Set with high AUC score but no cells assigned to cell type by eja.gssssse.r.m • 0

It sounds like your AUCell results may be showing high AUC scores without cell assignment due to thresholding or scoring cutoffs. Think of …

Answer: "Watched Tags" are being erased rather than updated by shepherl 4.2k

This should now be resolved

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Bioconductor 3.22 Released!

Comment: "Watched Tags" are being erased rather than updated

Comment: deseq2 filter the low counts

Answer: DESeq2 interactions

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Popular Question to Fred Hutch (Recruiting) ▴ 40