Bioconductor Hta2.0

Showing : hta2.0 • reset

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882

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HTA2.0 microarray affy r

3.2 years ago Marco_aurelio • 0

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1.1k

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affy rna hta2.0 r

updated 3.5 years ago by James W. MacDonald 64k • written 3.5 years ago by Marco_aurelio • 0

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1.2k

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oligo HTA2.0 affycoretools RMA fitProbeLevelModel

updated 4.4 years ago by James W. MacDonald 64k • written 4.4 years ago by Guido Hooiveld ★ 3.8k

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985

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microarray hta2.0 arrayqualitymetrics

updated 5.0 years ago by Mike Smith ★ 6.2k • written 5.0 years ago by RV ▴ 10

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1.6k

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hta2.0 annotation transcripts

updated 5.2 years ago by svlachavas ▴ 820 • written 5.2 years ago by Biomed • 0

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1.7k

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microarray scan.upc hta2.0

updated 5.9 years ago by Stephen Piccolo ▴ 590 • written 5.9 years ago by Lukas__ • 0

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1.2k

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differential exon usage exon array analysis annotation hta2.0 diffsplice

updated 6.2 years ago by James W. MacDonald 64k • written 6.2 years ago by relathman ▴ 20

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1.3k

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pd.hta.2.0 hta2.0 affycoretools

updated 6.3 years ago by James W. MacDonald 64k • written 6.3 years ago by relathman ▴ 20

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2.5k

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hta2.0 transcripts

6.3 years ago giroudpaul ▴ 40

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973

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affxparser cdf hta2.0

6.4 years ago relathman ▴ 20

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1.2k

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hta2.0 limma batch effect affymetrix microarrays ComBat

6.6 years ago svlachavas ▴ 820

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1.5k

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oligo hta2.0 affymetrix microarrays memory problem

updated 6.7 years ago by James W. MacDonald 64k • written 6.7 years ago by svlachavas ▴ 820

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3.0k

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oligo affycoretools hta2.0 affymetrix

updated 18 months ago by Yang Shi ▴ 10 • written 6.7 years ago by svlachavas ▴ 820

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799

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affyPLM fitPLM hta2.0

7.2 years ago Guido Hooiveld ★ 3.8k

14 results • Page 1 of 1

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Comment: Why is DMRcate not available for Bioconductor version 3.18? by Daniel E. Weeks ▴ 20

Thank you for the explanation and contacting the DSS package authors.

Comment: Why is DMRcate not available for Bioconductor version 3.18? by shepherl 3.6k

The DSS package authors just need to add `edgeR` to their Suggest of their DESCRIPTION. They have been contacted about it but have not acte…

Answer: GOslim missing GO term by James W. MacDonald 64k

I think it's because that GO term isn't an offspring of any term in the GO slim you are downloading. ``` > ids<- "GO:0002831" > slim <…

Answer: Obtaining rsIDs with ENSG and variant ID information by Robert Castelo ★ 3.0k

You should first and foremost find out what was the human reference genome version from which your dataset was derived. Assuming this was G…

Comment: DESeq2 - groups with biological replicates from the same patient by James W. MacDonald 64k

If by clustering you mean there might be a within-subject correlation, then yes it's a possibility. But you cannot control for that using a…

Votes

Comment: Why is DMRcate not available for Bioconductor version 3.18?

Comment: limma::voom vs edgeR::voomLmFit - when to use?

Answer: limma::voom vs edgeR::voomLmFit - when to use?

Awards • All

Scholar to James W. MacDonald 64k

Scholar to Assa Yeroslaviz ★ 1.5k