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distancetonearest
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distanceToNearest
rtracklayer
ranges
distanceToNearest
4 months ago
robjohn70000
• 0
2
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SOLVED. finding distance to nearest neighbour (non-self) within a list in GenomicRanges
GenomicRanges
GenomicFeatures
grange
distanceToNearest
R
4.5 years ago
rmash
▴ 20
0
votes
1
reply
1.1k
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GenomicRanges distanceToNearest: trouble replicating snp-gene mapping from older version
GenomicRanges
distancetonearest
strandedness
updated 6.1 years ago by
Valerie Obenchain
★ 6.8k • written 6.1 years ago by
shraddha.pai
• 0
2
votes
5
replies
1.2k
views
DistanceToNearest Not giving nearest Range
GRanges
distancetonearest
updated 6.4 years ago by
Julie Zhu
★ 4.3k • written 6.4 years ago by
chitsazanalex
▴ 10
0
votes
5
replies
4.5k
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Unable to find an inherited method for function distanceToNearest for signature GRanges
chipenrich
granges
distancetonearest
function
dataframe
6.5 years ago
rbronste
▴ 60
1
vote
14
replies
1.9k
views
DistanceToNearest() error: 'nLnode' and 'nRnode' must be single integers
genomicranges
DistanceToNearest
updated 7.7 years ago by
Valerie Obenchain
★ 6.8k • written 7.7 years ago by
roladali
▴ 20
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Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")
by
Marcel Ramos
690
`BiocManager` does not install local packages. It only installs Bioconductor, CRAN, and GitHub ones. You should install local packages w…
Comment: error running enricher from clusterprofiler
by
Yael
• 0
It worked!!! Thanks alot, i think something in the gene_list wasnt right... Thanks agian
Comment: Create protein sequences including variants from a VCF file
by
Yun
• 0
This cannot work for a SNV file, since `injectSNPs` need a `SNPlocs` object
Comment: Can log2cpm be used for proteomics data normalization?
by
Daniel
• 0
Thank you for the quick reply and I apologize for it being on the wrong thread but the "post tag" function wasn't working properly.
Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db")
by
Patadù
▴ 10
I have arranged the code again following the other post and also the script you suggested. Now, I managed to install `org.Vdahliae.eg.db`. …
Votes
Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Answer: Trim/Filter out-of-bounds GRanges
Comment: How to correctly adjust for gender in edgeR
Create protein sequences including variants from a VCF file
A: DEXSeq design formula
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