Showing : dnastringset • reset
2
votes
1
reply
1.2k
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DNAStringSet to DNAStringSetList according to pattern in sequence names
dnastringset dnastringsetlist seqnames
7.3 years ago s.ghignone ▴ 10
3
votes
4
replies
4.6k
views
How to convert a DnaStringSet object to list of seq?
dnastringset list stringset
updated 8.7 years ago by 25k • written 8.7 years ago by ▴ 50
2
votes
5
replies
5.9k
views
How to use subSeq with DNAStringSet and information of GroupedIRanges?
subseq Xvector dnastringset
updated 8.8 years ago by 16k • written 8.8 years ago by • 0
0
votes
2
replies
1.4k
views
how to deal with multiple barcodes/index in the analysis
dnastringset aastringset
9.0 years ago XIA.PAN ▴ 20
6
votes
6
replies
7.5k
views
how to extract part of the DNA sequences from a DNAstringset
DNAstringset
updated 9.0 years ago by 16k • written 9.0 years ago by ▴ 20
3
votes
1
reply
6.4k
views
extract subsequence(s) from DNAStringSet with getSeq
dnastringset getseq
updated 9.6 years ago by 16k • written 9.6 years ago by ▴ 80
2
votes
3
replies
2.5k
views
visualing pwm motif on a DNAstring
pwmenrich dnastringset
updated 9.9 years ago by ▴ 50 • written 9.9 years ago by ▴ 20
0
votes
4
replies
2.0k
views
Using iterators and foreach with doMC, using DNAStringSets
dnastringset parallel iterators
10.2 years ago ben.ward ▴ 30
0
votes
3
replies
1.6k
views
I want to sample (random ) nucleic acids at middle 20 positions of DNAstring set
DNAStringSet sample
updated 10.3 years ago by 16k • written 10.3 years ago by ▴ 50
15
votes
2
replies
20k
views
Extract sequence from DNAStringSet object
dnastringset
updated 10.3 years ago by 25k • written 10.3 years ago by ▴ 120
3
votes
8
replies
2.5k
views
problem with @ranges@start in DNAStringSet
vcf testthat dnastringset
10.3 years ago TimothéeFlutre ▴ 80
1
vote
5
replies
5.5k
views
Converting a DNAStringSetList to characters quickly
readVcf DNAStringSet DNAStringSetList variantannotation readvcf
10.9 years ago • updated 10.8 years ago dan.gatti • 0
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Comment: Question on processing compound protein groups in limpa by JKim • 0
Many thanks. I appreciate your advice.
Answer: Question on processing compound protein groups in limpa by Gordon Smyth 53k
Different people have different ways of dealing with compound protein groups. You could just leave them in the analysis, in which case limp…
Answer: Correct usage of limpa for protein input by Gordon Smyth 53k
limpa can work on protein-level quantifications, but they must be intensity-based and must be on the log scale. From what I read (<https://…
Comment: A problem occurs when running the monocle2 by a2a2hset32aa • 0
Troubleshooting monocle2 errors in R 4.5.1 often points to package incompatibilities, particularly with newer versions of igraph. For resea…
Comment: Deadline Extended: EuroBioC2026 Call for Abstracts by a2a2hset32aa • 0
Attending EuroBioC2026 is an excellent way for researchers to explore the intersection of technology and biology. For those seeking high qu…
Votes
Answer: Question on processing compound protein groups in limpa
Answer: Correct usage of limpa for protein input
Answer: Correct usage of limpa for protein input
Answer: Correct usage of limpa for protein input
A: Interpretaion of dendrogram height in WGCNA?
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