Bioconductor Enrichment analysis

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2.0k

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dmrcate enrichment analysis epic array goregion missmethyl

updated 4.4 years ago by Jovana Maksimovic ▴ 20 • written 5.4 years ago by yoursbassanio ▴ 10

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6.2k

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microarray limma kegg ENTREZ enrichment analysis

updated 5.8 years ago by Gordon Smyth 53k • written 5.8 years ago by omarrafiqued ▴ 50

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1.4k

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gosummaries gene ontology enrichment analysis

7.8 years ago jan.soderman • 0

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7.2k

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reactomepa pathway analysis enrichment analysis clusterprofiler

updated 8.0 years ago by Guangchuang Yu ★ 1.2k • written 8.0 years ago by Miguel.Cosenza ▴ 10

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4.7k

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clusterprofiler enrichment analysis

updated 8.9 years ago by Guangchuang Yu ★ 1.2k • written 8.9 years ago by fizer ▴ 40

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2.0k

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leading edge analysis enrichment analysis

9.1 years ago Adrian Johnson ▴ 330

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7.1k

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GSEA enrichment analysis gseabase

updated 9.4 years ago by Gordon Smyth 53k • written 9.4 years ago by Matthias Z. ▴ 20

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1.8k

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gene ontology goslim enrichment analysis gene annotation

9.6 years ago mirko • 0

8 results • Page 1 of 1

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Answer: mzR-Rcpp compiler version issue by Laurent Gatto 1.6k

There are two issues here. First, a warning about mzR, that you can safely ignore. It tells you that mzR was compiled using a different …

Comment: Identifying differentially expressed genes in individual samples from a large co by jamie.gearing ▴ 60

Great. Yes, something descriptive is probably good enough, even if the p-values themselves are not so rigorous. Thanks very much Gordon!

Comment: Co-occurrence Network Analysis between Algae and Bacteria by Stefano Mangiola ▴ 40

Just a placeholder, that we are extending `sccomp` to co-occurrence analyses. Yours could be a good use-case to test first. We will be in t…

Answer: DESeq2 design for haplotype MPRA by aimesd808 • 0

I appreciate you telling me about this. Now it's crystal plain to me. Publish this: https://support.bioconductor.org/p/9162649/

Answer: Extract snp information from genomic regions with biomaRt -> "oaries_snp" by Kevin Blighe ★ 4.0k

My sincere apologies that my colleagues had ignored your question. The error occurs because the "chromosomal_region" filter is not valid…

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Answer: Identifying differentially expressed genes in individual samples from a large co

Bioconductor Seminar Series - Dec 2: Deep-learning Gene Perturbation Effect Prediction

Comment: What R/Bioconductor tools would you recommend for the analysis of sncRNA, specif

Comment: Error installing Seqinfo

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