Bioconductor Epicarray

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limma epicarray IlluminaHumanMethylationEPICanno.ilm10b2.hg19

written 12 months ago by Melisa Tecik • 0

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stattistics epicarray Epigenetics DMRcate

updated 2.1 years ago by James W. MacDonald 68k • written 2.1 years ago by Jitendra ▴ 10

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linearregression epicarray MethylationArray limma

2.3 years ago Jitendra ▴ 10

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RnBeads minfiData minfi EPICarray

updated 2.6 years ago by Basti ▴ 780 • written 2.6 years ago by Jitendra ▴ 10

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champ.load epicarray ChAMP methylationArrayAnalysis

2.6 years ago arisarkar88 ▴ 40

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methylationArrayAnalysis EPICarray ChAMP Champ.SVD

4.7 years ago arisarkar88 ▴ 40

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ChAMP methylationepic epicarray epigenomics

updated 8.2 years ago by rcavalca ▴ 140 • written 8.2 years ago by karthikrpad ▴ 10

7 results • Page 1 of 1

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Comment: Question about RE-agnostic mode for intact Hi-C and Micro-C normalization(HiCDCP by TikTsoksocissalpc • 0

Normalizing complex datasets like Hi C can be challenging, much like setting up a PC for optimal gaming performance. Just as careful tuning…

Comment: p.adjust BH Question by TikTsoksocissalpc • 0

Thanks for sharing your question about RMA limma analysis While working on your experiment, it s always helpful to have some background mu…

Answer: NUPOP usage by shepherl 4.2k

You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…

Comment: How can I correctly use phyloseq with Docker? by fnfgame • 0

In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …

Comment: DECIPHER DesignProbes unable to design FISH-probes by Erik Wright ▴ 150

Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?

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C: DESeq2 Following RSEM

Upcoming Ensembl API and data access changes - new blog post available

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Large logFC but somewhat high FDR

Comment: upstream git branches of bioc-release

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