Bioconductor Error

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4.9k

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org.hs.eg.db annotationdbi error

updated 10.5 years ago by Dan Tenenbaum ★ 8.2k • written 10.5 years ago by tina.khajeh • 0

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837

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error

10.6 years ago sow19872003 • 0

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1.9k

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biomart getbm error

10.7 years ago Tibor Fulop • 0

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1.7k

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medips bioconductor error source code

10.9 years ago malbert1 • 0

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1.8k

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arrayqualitymetrics bugs error

updated 11.0 years ago by James W. MacDonald 68k • written 11.0 years ago by daugherty_a • 0

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1.1k

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chipseq error

11.0 years ago wtimp0 ▴ 10

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1.9k

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edger rnaseq error

updated 11.0 years ago by James W. MacDonald 68k • written 11.0 years ago by melissabarrett747 • 0

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3.4k

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DEX error simpleLoess RNAseq

updated 11.1 years ago by Alejandro Reyes ★ 1.9k • written 11.1 years ago by cfreije ▴ 10

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2.2k

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variantannotation seqlevels error

updated 11.1 years ago by Valerie Obenchain ★ 6.8k • written 11.1 years ago by Asma rabe ▴ 290

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Comment: Could we detect difference at pathway level but not significant different at gen by Chi • 0

The extrusion process affects kibble texture flavor and digestibility shaping both nutrition and taste. Balance is keyjust like in http://r…

Comment: Could we detect difference at pathway level but not significant different at gen by Chi • 0

GSVA works when gene level changes are small but pathways shift as a group. After your analysis take a quick break with https://cookieclick…

Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in by dan.gatti • 0

I am, but perhaps I'm not understanding how it should work. > sse = DropletUtils::read10xCounts(curr_files[1], mtx.class = 'SVT_Sparse…

Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in by James W. MacDonald 68k

Did you use the development version as Aaron suggested? There is an argument to read the market matrix file directly into an `SVT_SparseMat…

Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in by dan.gatti • 0

Was anyone else able to put the pieces together using the reply above? I read in one 10X sample using DropletUtils::read10xCounts() and thi…

Votes

Comment: Check removeBatchEffect effectiveness

Comment: Streamlining the computing time for MiloDE p-value correction in large dataset?

Answer: DESeq2 design for haplotype MPRA

A: Different logFC (log2foldchange) values for genes from limma-voom and other too

Comment: Check removeBatchEffect effectiveness

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