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exomecopy
•
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0
votes
4
replies
2.6k
views
error in exomeCopy - IRanges?
IRanges
exomeCopy
IRanges
exomeCopy
updated 11.8 years ago by
love
▴ 150 • written 11.8 years ago by
Lescai, Francesco
▴ 380
0
votes
4
replies
703
views
exomeCopy compileCopyCountSegments error
exomeCopy
updated 4.8 years ago by
Michael Love
41k • written 4.8 years ago by
kkyung412
• 0
0
votes
4
replies
2.4k
views
exomeCopy - memory error
exomeCopy
exomeCopy
updated 11.6 years ago by
love
▴ 150 • written 11.6 years ago by
Lescai, Francesco
▴ 380
0
votes
3
replies
1.0k
views
exomeCopy error with compileCopyCountSegments
exomecopy
cnv
6.3 years ago
ramakrishnas
• 0
0
votes
3
replies
779
views
exomeCopy error in col name
exomecopy
updated 6.2 years ago by
Michael Love
41k • written 6.2 years ago by
chiara.rigobello
• 0
0
votes
2
replies
1.1k
views
exomeCopy - no .Internal function 'cov' error
exomeCopy
exomeCopy
updated 11.8 years ago by
Martin Morgan
25k • written 11.8 years ago by
Lescai, Francesco
▴ 380
1
vote
2
replies
1.3k
views
Journal articles for whole exome sequencing
exomecopy
exon array analysis
CODEX
9.0 years ago
kaushal Raj Chaudhary
▴ 10
0
votes
2
replies
1.5k
views
ExomeCopy error
exomeCopy
exomeCopy
updated 11.0 years ago by
Michael Love
41k • written 11.0 years ago by
Kevin Lee
▴ 40
0
votes
1
reply
644
views
exomeCopy warning and error
exomeCopy
updated 23 months ago by
Michael Love
41k • written 23 months ago by
ef.kafantari
• 0
0
votes
1
reply
1.3k
views
copyCountSegments(fit) failed exomeCopy
exomeCopy
exomeCopy
updated 12.0 years ago by
love
▴ 150 • written 12.0 years ago by
Dan Spiegelman
▴ 10
0
votes
1
reply
931
views
question about using exomeCopy on a single exome sample
exomeCopy
exomeCopy
updated 11.0 years ago by
Michael Love
41k • written 11.0 years ago by
Guru Ananda
▴ 10
0
votes
1
reply
1.2k
views
exomeCopy copy number setting
cnv
exomecopy
updated 8.5 years ago by
Michael Love
41k • written 8.5 years ago by
cafelumiere12
▴ 20
0
votes
1
reply
979
views
exomeCopy Posterior Probabilities
exomecopy
updated 6.5 years ago by
Michael Love
41k • written 6.5 years ago by
sruddy17
• 0
0
votes
1
reply
542
views
Discrepancy between plot colours during exomeCopy tutorial
exomeCopy
updated 23 months ago by
Michael Love
41k • written 23 months ago by
joel.wallenius
• 0
0
votes
0
replies
868
views
copyCountSegments(fit) failed exomeCopy
exomeCopy
exomeCopy
12.1 years ago
love
▴ 150
0
votes
0
replies
576
views
Applying exomeCopy to call CNVs withouts controls considering batch effects
exomeCopy
CNV
WES
3.1 years ago
Cheng
• 0
0
votes
0
replies
913
views
Fwd: ExomeCopy package error
Sequencing
exomeCopy
Sequencing
exomeCopy
11.4 years ago
love
▴ 150
0
votes
0
replies
1.1k
views
ExomeCopy package error
Sequencing
exomeCopy
Sequencing
exomeCopy
11.4 years ago
Guest User
★ 13k
18 results • Page
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Replies
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
by
Hervé Pagès
16k
Indeed. Calculations involving floating point arithmetic are architecture-dependent, and testing the results should be done with `all.equal…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
I will follow what you suggested. I didn't use max gap anywhere. I was following statistic I and regarding the size of features, my small…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
41k
Oh I see, for the second question, I don't have a great answer. I typically think of one set as the anchor, whose ascertainment is driving …
Comment: Help with running egsea()
by
James W. MacDonald
65k
Oh, right. Ideally you would use NCBI (aka Entrez gene) IDs because they are way more likely to be unique. Gene symbols are broken down int…
Comment: Help with running egsea()
by
Chris
• 0
Thanks James! I update the question. The last question mean when we use `buildIdx()`, could we use gene symbol instead of entrezID. However…
Votes
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Help with running egsea()
Answer: Trim/Filter out-of-bounds GRanges
Comment: Help with running egsea()
Answer: How to save the DEXSeq results
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