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fcs
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Modifying or writing a FCS file in R using the FlowCore package
FCS
flowframe
flowcore
flow cytometry
5.7 years ago
vonskopnik
▴ 10
3
votes
3
replies
2.5k
views
flowcore: z-Score normalization of flowSet (fsApply or normalize)
flowcore
fcs
normalization
flowstats
updated 8.8 years ago by
Jiang, Mike
★ 1.3k • written 8.8 years ago by
BenAbflack
• 0
1
vote
1
reply
2.0k
views
Loading FCS files
FCS
flow cytometry
bioconductor
phenoData
Loading Data
updated 7.3 years ago by
SamGG
▴ 350 • written 7.3 years ago by
smajor
• 0
3
votes
1
reply
2.0k
views
Convert Flowframe to matrix
flowcore
fcs
flow cytommetry
matrix
conversion
updated 4.9 years ago by
Jake Wagner
▴ 310 • written 4.9 years ago by
apurva
• 0
0
votes
3
replies
1.3k
views
Loop for mass analyses and extraction of FCS data
Exprs
Lapply
FCS
for loop
flowcore
updated 6.5 years ago by
Jiang, Mike
★ 1.3k • written 6.5 years ago by
Wilson Yeo
• 0
0
votes
0
replies
1.1k
views
How to load additional data from fcs files
fcs
concentration
experimentdata
7.0 years ago
jurg.spaak
• 0
0
votes
0
replies
1.1k
views
Trimming FCS files doesn't decrease size
FCS
8.7 years ago
Nick England
• 0
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Comment: DNAString: Standard checksum function?
by
Henrik Bengtsson
★ 2.4k
For completeness: SEGUID v2 (https://www.seguid.org/), implemented in CRAN package **[seguid](https://cran.r-project.org/package=seguid)*…
Comment: fgsea significant result
by
Chris
• 0
Thanks ATpoint! Setting a fixed seed can reproduce the same result. However, if someone else analyze the same data with different seed, the…
Comment: SGSeq: moving toward diffex from SGSeq analysis
by
Sara
• 0
Thank you for your response. I have another question about saving the sgvc result as a CSV file. I would appreciate your help, please. ``` …
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
I tried different block lengths first and considered 100000 to be ideal because of the almost similar inter-range distance. S1= bootRange…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
41k
The segmentation and block length are key parameters. We recommend for example blocks of length ~500kb. It would help if you would post yo…
Votes
Handling multiple differential expression comparisons
Answer: fgsea significant result
Answer: fgsea significant result
package goseq seems to be not available on the latest version of R
package goseq seems to be not available on the latest version of R
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