Bioconductor FeatureCounts

Showing : featureCounts • reset

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281

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featureCounts Rsubread

6 weeks ago • updated 28 days ago isaac.vock • 0

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158

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FeatureCounts Rsubread

10 weeks ago chris2.a.white • 0

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289

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featureCounts Rsubread

updated 10 weeks ago by Wei Shi ★ 3.6k • written 3 months ago by Alex • 0

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471

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featureCounts Rsubread

updated 3 months ago by Gordon Smyth 50k • written 3 months ago by tjgray4 • 0

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778

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featurecounts Rsubread

3 months ago isaac.vock • 0

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987

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rpkm edgeR featureCounts

8 months ago Gordon Smyth 50k

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1.1k

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RNASeqData Rsubread mapping featurecounts

updated 9 months ago by James W. MacDonald 65k • written 9 months ago by vitoriastavis • 0

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684

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Rsubread featureCounts

updated 10 months ago by Yang Liao ▴ 380 • written 10 months ago by StevenE.Strong • 0

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4.8k

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subread featureCounts

updated 9 months ago by Yang Liao ▴ 380 • written 2.9 years ago by s.muroy ▴ 10

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3.5k

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RNA-seq featureCounts ht-seq

written 3.8 years ago by ag1805x ▴ 80

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2.3k

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featurecounts SAM htseqcounts

updated 10 months ago by Yang Liao ▴ 380 • written 7.0 years ago by courtney.stairs • 0

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1.6k

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rsubread featurecounts summarizeoverlaps

updated 6 weeks ago by isaac.vock • 0 • written 7.9 years ago by Jon Manning ▴ 90

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18k

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featurecounts rsubread

updated 11 months ago by Robert • 0 • written 9.0 years ago by samuel collombet ▴ 140

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6.2k

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rsubread featurecounts

updated 3 months ago by Gordon Smyth 50k • written 9.2 years ago by Ryan C. Thompson ★ 7.9k

14 results • Page 1 of 1

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Comment: DESeq2- Mysterious interaction suppresses DEGs by shaunpeterson • 0

The images I tried to attach didn't attach. Here is the PCA (MDS) of all the samples, with the Cortex outlier highlighed. ![enter image de…

Comment: STRINGdb : error with string_db$plot_network() by damian.szk ▴ 80

ok. Forcing non-secure protocol should not be needed anymore, due to changes in the underlying library. However, I will look at why "HTTP" …

Comment: STRINGdb : error with string_db$plot_network() by ninidea • 0

> Does the vignette produce the same error? No. Anyway, I finally solved the problem. I don't know why, but I removed: protocol='http' fr…

Comment: maSigPro genes from clusters by anne-laure • 0

Hello It is a litlle bit late but I do not get how to extract the genes from each cluster identified by see.genes(sigs$sig.genes$Day4vs…

Comment: STRINGdb : error with string_db$plot_network() by damian.szk ▴ 80

Your code seems ok. Does the vignette produce the same error? [link to STRINGdb R script vignette][1] [1]: https://www.bioconductor.or…

Votes

Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")

Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa

Rsubread counting peaks ATACseq

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