Bioconductor Filtervcf

Showing : filtervcf • reset

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3.5k

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variantannotation vcf readvcf filtervcf scanvcfparam

8.5 years ago Didi ▴ 10

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4.0k

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filtervcf

updated 9.1 years ago by Martin Morgan 25k • written 9.1 years ago by Bogdan ▴ 670

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1.3k

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filtervcf variantannotation

updated 9.2 years ago by Martin Morgan 25k • written 9.2 years ago by stephen sefick ▴ 60

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1.6k

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variantannotation filtervcf

updated 10.3 years ago by Michael Lawrence ★ 11k • written 10.3 years ago by TimothéeFlutre ▴ 80

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1.8k

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variantannotation vcf filtervcf

updated 10.3 years ago by Martin Morgan 25k • written 10.3 years ago by TimothéeFlutre ▴ 80

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1.6k

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variantannotation filtervcf vcf

updated 10.3 years ago by Michael Lawrence ★ 11k • written 10.3 years ago by TimothéeFlutre ▴ 80

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2.0k

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VariantAnnotation filterVcf ScanVcfParam vcf writeVcf

updated 10.5 years ago by Martin Morgan 25k • written 10.5 years ago by pau.puigdevall • 0

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2.1k

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VariantAnnotation filterVcf

10.5 years ago pau.puigdevall • 0

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2.8k

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variantannotation filterVcf readvcfasvranges filterRules

updated 10.9 years ago by Martin Morgan 25k • written 10.9 years ago by Sigve Nakken ▴ 50

9 results • Page 1 of 1

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Comment: Upcoming Ensembl API and data access changes - new blog post available by Tikaaa2sahaaaq2c • 0

Just as the Ensembl team transitions to a new platform for streamlined data access, diners can benefit from a digital newks menu prices con…

Comment: Error message that there is no package called Biobase by DamionLedner99 • 0

thanks for sharing!!! https://cran.r-project.org/

Comment: msmsTests, inconsistent sign between lFC.Av and LogFC by Ben • 0

Continued here due to posting difficulties: Extract from the results table: ``` Inhibitor Vehicle lFC.Av LogFC ... F1 0.0 27…

Answer: DESeq2 for 16S rRNA Analysis by James W. MacDonald 68k

The Wald test is only meant for comparison of two groups at a time, so it depends on what you mean by 'analyze across multiple groups at a …

Comment: MetaDE.pvalue: Error in xj[i]: invalid subscript type 'list' by varying.mastodon.isyn • 0

Oh, that error! I remember wrestling with that one for hours when I was first learning Python. Turns out I was trying to use a list itself …

Votes

Answer: What happens to genes with low dispersion during dispersion shrinkage in DESeq2

Comment: Are transformed values from rlog /vst log2 normalized counts?

Answer: Are transformed values from rlog /vst log2 normalized counts?

A: DESeq2 normalization vs VST vs rlog

Answer: How to directly decet the outlier samples (libraries) in EdgeR pipeline

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Teacher to Michael Love 43k

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Popular Question to James W. MacDonald 68k