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3.8k

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clusterProfiler GO GO enrichment genesetenrichment

updated 7 weeks ago by jandrade • 0 • written 6.4 years ago by Huang, Lei [BSD] - CRI ▴ 20

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268

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DNAMethylation GO MethylationArray missMethyl EPICv2

updated 9 weeks ago by belinda.phipson ▴ 40 • written 9 weeks ago by s.malik • 0

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364

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GO limma CAMERA

updated 12 weeks ago by Gordon Smyth 50k • written 12 weeks ago by Tyler Sagendorf ▴ 10

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5.0k

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clusterProfiler AnnotationHub GO uniprot

updated 3 months ago by Guido Hooiveld ★ 3.9k • written 3.3 years ago by Alberto • 0

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425

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GO EnrichmentBrowser

updated 3 months ago by James W. MacDonald 65k • written 3 months ago by prity6459 • 0

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572

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GO ensembldb

6 months ago Rockbar • 0

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430

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go DESeq2

updated 7 months ago by James W. MacDonald 65k • written 7 months ago by Alvin • 0

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629

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GO biomaRt

updated 9 months ago by James W. MacDonald 65k • written 9 months ago by cstorer • 0

8 results • Page 1 of 1

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Answer: Differential gene expression analysis results by ATpoint ★ 4.1k

Pease do not open multiple posts for the same issue: https://support.bioconductor.org/p/9158194/#9158222 The support site is not meant f…

Comment: deseq2 results by sajadahmad41454 • 0

thank you for your response, should i remove or discard that sample? since the red outlier on left represents one of healthy samples.

Comment: deseq2 results by swbarnes2 ★ 1.4k

It looks like the PCA plot of a real RNASeq experiment. The red outlier on the left might be the mathematical reason why you have few vali…

Comment: Multi-factorial, longitudinal disease progression analysis with unbalanced patie by Dylan.Sheerin • 0

Thank you very much, Gordon. I'll give voomLmFit a go!

Answer: Multi-factorial, longitudinal disease progression analysis with unbalanced patie by Gordon Smyth 50k

Including subjectID in the design matrix always accounts for unbalanced sampling and patient variation but subjects with incomplete records…

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Comment: deseq2 results

Answer: Multi-factorial, longitudinal disease progression analysis with unbalanced patie

Answer: Extremely small p-values using Limma for proteomic data

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