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uniprot
•
reset
2
votes
5
replies
2.3k
views
UniprotKB AC/ID to Entrez ID Conversion
ID
Uniprot
EntrezID
16 months ago
tom.kloter
• 0
3
votes
9
replies
3.7k
views
GO enrichment analysis on Solanum lycopersicum proteomics dataset (UniProt IDs)
clusterProfiler
AnnotationHub
GO
uniprot
updated 6 weeks ago by
Jerina
▴ 10 • written 2.7 years ago by
Alberto
• 0
1
vote
1
reply
644
views
UniProt.ws - Speeding up select() for data retrieval
UniProt.ws
UniProt
updated 2.9 years ago by
James W. MacDonald
63k • written 2.9 years ago by
JavierM
• 0
2
votes
3
replies
840
views
Uniprot and UniProt.ws
Uniprot
Annotation
Identifiers
4.4 years ago
Juliet Hannah
▴ 360
4
votes
2
replies
698
views
drawProteins from Uniprot entry (missing chain information)
drawProteins
uniprot
updated 4.7 years ago by
James W. MacDonald
63k • written 4.7 years ago by
mblango
• 0
1
vote
4
replies
900
views
UniProt.ws non-functional or abandoned?
uniprot.ws
uniprot
uniprot accessions
updated 4.9 years ago by
James W. MacDonald
63k • written 4.9 years ago by
balin
• 0
0
votes
2
replies
901
views
Error retrieving data with biomaRt
biomart
r
getbm
uniprot
5.6 years ago
lluex.rova
• 0
0
votes
1
reply
940
views
UniProt.ws - single database for two species
uniprot.ws
uniprot
updated 5.9 years ago by
James W. MacDonald
63k • written 5.9 years ago by
l.nilse
• 0
0
votes
1
reply
1.3k
views
org.Mm.eg.db UNIPROT missing values
Annotation
mouse
UNIPROT
updated 6.0 years ago by
Mike Smith
★ 6.1k • written 6.0 years ago by
julie.chevalier
• 0
1
vote
7
replies
1.6k
views
UniProt.ws report 1:many mappings in a single row
uniprot.ws
UniProt
annotation
6.9 years ago
l.nilse
• 0
0
votes
3
replies
982
views
Accessing feature data of a Malus domestica Nimblegen microarray
nimblegen
Biomart
Uniprot
updated 6.9 years ago by
Gordon Smyth
48k • written 6.9 years ago by
theobroma22
▴ 10
4
votes
1
reply
1.4k
views
Converting Protein Accessions Into Protein Symbols
uniprot
uniprot.ws
7.6 years ago
Dario Strbenac
★ 1.5k
2
votes
4
replies
2.7k
views
UniProt.ws version 2.10.2
uniprot.ws
subcellular location
uniprot
7.6 years ago
DHS
• 0
0
votes
3
replies
1.2k
views
Anotations Score of uniprot. ws
uniprot.ws
uniprot
updated 7.8 years ago by
James W. MacDonald
63k • written 7.8 years ago by
cerikahp
• 0
2
votes
2
replies
1.1k
views
Is there a package that has Uniprot protein descriptions?
uniprot.ws
uniprot
uniprot accessions
software error
updated 7.9 years ago by
James W. MacDonald
63k • written 7.9 years ago by
john
▴ 10
2
votes
14
replies
3.5k
views
Unimart not available in 2015?
biomart
uniprot
unimart
7.9 years ago
john
▴ 10
1
vote
4
replies
3.5k
views
problem with retrieving UniProt annotation data
uniprot.ws
uniprot
updated 8.6 years ago by
Marc Carlson
★ 7.2k • written 8.6 years ago by
Guido Hooiveld
★ 3.7k
0
votes
6
replies
2.0k
views
converting UniProt to SGD ids using UniProt.wd
uniprot.ws
uniprot
ensembl
updated 8.7 years ago by
Marc Carlson
★ 7.2k • written 8.7 years ago by
Joseph Barry
▴ 160
0
votes
2
replies
1.3k
views
Missing ensembl_ids in biomaRt uniprot query
biomaRt
uniprot
ensembl
updated 8.8 years ago by
me
• 0 • written 8.8 years ago by
António Miguel de Jesus Domingues
▴ 490
19 results • Page
1 of 1
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Replies
Comment: Exporting DESeq2 filtered results
by
James W. MacDonald
63k
I am interested to know what part of my response you found rude. I asked nicely that you don't add to ancient posts, said your post isn't r…
Comment: Speeding up of DelayedArray::write_block()
by
Hervé Pagès
16k
> I can imagine writing a sparse high-dimensional array in HDF5, but I'm still not sure how to implement the part where it is read and imme…
Comment: Speeding up of DelayedArray::write_block()
by
Hervé Pagès
16k
Not in BioC 3.18. At some point (e.g. in 6 months) they will be deprecated, then 6 months later (i.e. in 1 year) they will be defunct, then…
Comment: Biostrings error at retrieving protein sequences
by
Hervé Pagès
16k
Yes, but you need to put the clean names back on the AAStringSet object: ``` names(protein_sequences) <- gsub(" .*", "", names(protein_sequ…
Comment: Exporting DESeq2 filtered results
by
camillab.
▴ 10
thanks! I didn't`t notice that. I will cancel it now!
Votes
Answer: Error MakeOrgPackagefromNCBI
Batch Effect in DESeq2, how to control, how to remove it, how to address biological question
A: BiomaRt Arabidopsis genome unavailable
Answer: enrichKEGG
A: Effect of lfcThreshold on p-value in DESeq2
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Gordon Smyth
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★ 3.7k
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