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goprofiles
•
reset
3
votes
9
replies
3.7k
views
Create object "Go3AnnDbBimap" and include it in a org.Xx.eg.db package to use with goProfiles and goTools
goprofiles
AnnotationForge
Bimap
GO
11.4 years ago
artur
▴ 80
0
votes
8
replies
2.6k
views
PreProcess and Limma 'done'. What directions now?
goProfiles
goProfiles
updated 16.7 years ago by
Steve Lianoglou
★ 13k • written 16.7 years ago by
Massimo Pinto
▴ 390
0
votes
2
replies
1.5k
views
namespace error with goProfiles package
GO
mouse4302
goProfiles
GO
mouse4302
goProfiles
updated 17.7 years ago by
Alex Sanchez
▴ 20 • written 17.7 years ago by
Straubhaar, Juerg
▴ 300
0
votes
2
replies
2.1k
views
How to make my own GO.db?
GO
goProfiles
GO
goProfiles
updated 15.7 years ago by
Marc Carlson
★ 7.2k • written 15.7 years ago by
Xiaohui Wu
▴ 280
0
votes
2
replies
1.4k
views
Profiles
GO
goProfiles
GO
goProfiles
updated 13.4 years ago by
Steve Lianoglou
★ 13k • written 13.4 years ago by
Guest User
★ 13k
0
votes
2
replies
1.5k
views
Gene Ontologies exploration
goProfiles
GeneAnswers
goProfiles
GeneAnswers
updated 13.1 years ago by
Marc Carlson
★ 7.2k • written 13.1 years ago by
Jose M Garcia Manteiga
▴ 310
0
votes
1
reply
1.2k
views
I want to convert the go enrichment result to a data frame (tidy data)with two column which one is the gene symbol and the other is go term. Any one…
GO.db
GOfuncR
GO
GOSim
goProfiles
updated 3.4 years ago by
Basti
▴ 780 • written 3.4 years ago by
yeluo
• 0
0
votes
1
reply
1.8k
views
How to cluster genes based on their GO term in Arabidopsis?
GO
Cancer
Prostate
goProfiles
GO
Cancer
Prostate
goProfiles
updated 15.7 years ago by
James W. MacDonald
68k • written 15.7 years ago by
Xiaohui Wu
▴ 280
0
votes
0
replies
2.0k
views
Ontology lack in goProfiles : no BP or CC just MF
GO
goProfiles
GO
goProfiles
11.9 years ago
Arnaud Mounier
▴ 40
0
votes
0
replies
1.6k
views
error while using goProfiles package on arabidopsis entrez gene IDs
GO
Organism
goProfiles
GO
Organism
goProfiles
12.5 years ago
Marc Carlson
★ 7.2k
0
votes
0
replies
1.3k
views
How to compare GO results
Annotation
GO
topGO
goProfiles
Annotation
GO
topGO
goProfiles
16.5 years ago
Johannes Hanson
▴ 30
0
votes
0
replies
1.0k
views
Problem about using "goProfiles"
Category
goProfiles
Category
goProfiles
15.7 years ago
wei tie
▴ 30
0
votes
0
replies
2.0k
views
error while using goProfiles package on arabidopsis entrez gene IDs
goProfiles
goProfiles
12.5 years ago
Guest User
★ 13k
0
votes
0
replies
1.2k
views
plotProfiles (goProfiles) and bitmap
GO
graph
goProfiles
GO
graph
goProfiles
16.7 years ago
Jean-Pierre Desvignes
▴ 60
14 results • Page
1 of 1
Recent ...
Replies
Comment: Question on processing compound protein groups in limpa
by
JKim
• 0
Many thanks. I appreciate your advice.
Answer: Question on processing compound protein groups in limpa
by
Gordon Smyth
53k
Different people have different ways of dealing with compound protein groups. You could just leave them in the analysis, in which case limp…
Answer: Correct usage of limpa for protein input
by
Gordon Smyth
53k
limpa can work on protein-level quantifications, but they must be intensity-based and must be on the log scale. From what I read (<https://…
Comment: A problem occurs when running the monocle2
by
a2a2hset32aa
• 0
Troubleshooting monocle2 errors in R 4.5.1 often points to package incompatibilities, particularly with newer versions of igraph. For resea…
Comment: Deadline Extended: EuroBioC2026 Call for Abstracts
by
a2a2hset32aa
• 0
Attending EuroBioC2026 is an excellent way for researchers to explore the intersection of technology and biology. For those seeking high qu…
Votes
Answer: Question on processing compound protein groups in limpa
Answer: Correct usage of limpa for protein input
Answer: Correct usage of limpa for protein input
Answer: Correct usage of limpa for protein input
A: Interpretaion of dendrogram height in WGCNA?
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