Bioconductor Gosim

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GO Yeast GOSim GO Yeast GOSim

updated 7.2 years ago by solis • 0 • written 12.0 years ago by Guest User ★ 13k

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1.2k

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GOSim GOSim

updated 13.0 years ago by Wolfgang Huber ★ 13k • written 13.0 years ago by LEMAITRE Hervé Université Paris Sud ▴ 10

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GO Organism biomaRt GOSim GO Organism biomaRt GOSim

updated 12.7 years ago by Olivier Lucas ▴ 40 • written 12.7 years ago by Marc Carlson ★ 7.2k

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gosim gosemsim

updated 7.1 years ago by Lluís Revilla Sancho ▴ 730 • written 8.6 years ago by s.apocarpum ▴ 10

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GOSim

updated 5.5 years ago by Lluís Revilla Sancho ▴ 730 • written 5.5 years ago by monifass ▴ 10

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Annotation GO Yeast biomaRt GOSemSim GOSim Annotation GO Yeast biomaRt GOSemSim GOSim

updated 14.7 years ago by Marc Carlson ★ 7.2k • written 14.7 years ago by Gang Chen ▴ 20

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GOSim GOSemSim

updated 15 months ago by Lluís Revilla Sancho ▴ 730 • written 15 months ago by eliska.ochodkova ▴ 10

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1.2k

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GO Organism biomaRt GOSim GO Organism biomaRt GOSim

12.7 years ago Olivier Lucas ▴ 40

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834

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GOSim GOSim

11.7 years ago ANIRBAN BHAR ▴ 60

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993

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Yeast Organism GOSim Yeast Organism GOSim

11.6 years ago Pablo Andretta Jaskowiak ▴ 10

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686

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GO.db GOfuncR GO GOSim goProfiles

updated 19 months ago by Basti ▴ 780 • written 19 months ago by yeluo • 0

11 results • Page 1 of 1

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Comment: package goseq seems to be not available on the latest version of R by Gordon Smyth 50k

limma most certainly is available. It installs in R 4.4.0 and Bioc 3.19 with no issues at all. If you're having trouble with Bioc installa…

Comment: package goseq seems to be not available on the latest version of R by Patrycja ▴ 20

limma package also isn't available.Is there any information when these packages will be available?

Comment: Why does GSEA on edgeR results for randomized samples give highly significant p- by Chris • 0

Thanks Gordon for the advice! I ran fgsea, gsva and camera(), the most significant pathways are different. For the purpose of finding pathw…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 41k

Check the number of bootstrapped data per chromosome compared to the original, and then you can also look at its distribution. For this it'…

Comment: DNAString: Standard checksum function? by Henrik Bengtsson ★ 2.4k

For completeness: SEGUID v2 (https://www.seguid.org/), implemented in CRAN package **[seguid](https://cran.r-project.org/package=seguid)*…

Votes

Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-

Handling multiple differential expression comparisons

Answer: fgsea significant result

package goseq seems to be not available on the latest version of R

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Scholar to ATpoint ★ 4.1k